RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 SCNN1AP37088 669 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 IFNAR2P48551 515 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 HARS2P49590 506 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SULT1E1P49888 294 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TUBP50607 506 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EPHA5P54756 1037 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 USP46P62068 366 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DEUP1Q05D60 604 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GFPT1Q06210 699 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 KIF5AQ12840 1032 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NR1H3Q13133 447 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NME3Q13232 169 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MTA1Q13330 715 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SMAD2Q15796 467 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ARL13BQ3SXY8 428 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PTPN20Q4JDL3 420 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 RAB41Q5JT25 222 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZFYVE27Q5T4F4 411 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 HGSNATQ68CP4 663 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 FAM183BPQ6ZVS7 135 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GPRIN1Q7Z2K8 1008 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PHLDB2Q86SQ0 1253 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 XYLT1Q86Y38 959 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 UNC45BQ8IWX7 931 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MCOLN2Q8IZK6 566 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CMTM8Q8IZV2 173 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SCML4Q8N228 414 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 WDTC1Q8N5D0 677 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CELF5Q8N6W0 485 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ARL14EPQ8N8R7 260 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SHKBP1Q8TBC3 707 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZSCAN18Q8TBC5 510 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 FGF13Q92913 245 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SMARCD2Q92925 531 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NXPE3Q969Y0 559 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EXOC4Q96A65 974 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TCEAL4Q96EI5 215 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CALR3Q96L12 384 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SERPINB11Q96P15 392 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PCDHB18PQ96TA0 734 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EIF3CQ99613 913 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CHP1Q99653 195 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DDX50Q9BQ39 737 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 POMKQ9H5K3 350 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZNF334Q9HCZ1 680 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 METTL5Q9NRN9 209 aaKnown RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SPTLC3Q9NUV7 552 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TDP1Q9NUW8 608 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SMPD4Q9NXE4 827 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MARCH2Q9P0N8 246 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 COX16Q9P0S2 106 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PRKAG3Q9UGI9 489 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 USTQ9Y2C2 406 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZNF510Q9Y2H8 683 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 EPN1Q9Y6I3 576 aaPredicted RBP5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 USP3Q9Y6I4 520 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CHD9Q3L8U1 2897 aa5.7□□□□□ -1.5
SCARNA16.4-201ENST00000516956 C2orf78A6NCI8 922 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SOWAHDA6NJG2 315 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SIGLEC16A6NMB1 481 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 YJEFN3A6XGL0 299 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 HHLA1C9JL84 531 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 E7ENQ6 273 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 M0QYT0 321 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MYO1FO00160 1098 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PAPSS1O43252 624 aaPredicted RBP5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CCP110O43303 1012 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ZSCAN12O43309 604 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 DAB1O75553 588 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NDUFA10O95299 355 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CYBBP04839 570 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 CCDC175P0C221 793 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TMEM253P0C7T8 217 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GPD1P21695 349 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 RRM1P23921 792 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PSMA2P25787 234 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MATKP42679 507 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GABRB2P47870 512 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC11A2P49281 568 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GALCP54803 685 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TBX4P57082 545 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 AMPD2Q01433 879 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TFF2Q03403 129 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ARID5BQ14865 1188 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 C2CD6Q53TS8 623 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 PRSS36Q5K4E3 855 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SNX30Q5VWJ9 437 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 E4F1Q66K89 784 aaPredicted RBP5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NUGGCQ68CJ6 796 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SCYL2Q6P3W7 929 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 WDR59Q6PJI9 974 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 GAREM2Q75VX8 874 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 MON1BQ7L1V2 547 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 BEND5Q7L4P6 421 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 SLC26A9Q7LBE3 791 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 TMC8Q8IU68 726 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 ARID3BQ8IVW6 561 aaPredicted RBP5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 LRRC8AQ8IWT6 810 aa5.69□□□□□ -1.5
SCARNA16.4-201ENST00000516956 NPAS3Q8IXF0 933 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms