RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 EPB41P11171 864 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FGFR1P11362 822 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ATP2A2P16615 1042 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SYN1P17600 705 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LAG3P18627 525 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ENDOUP21128 410 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FGFR4P22455 802 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LRPAP1P30533 357 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GTF2H1P32780 548 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PPM1AP35813 382 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PSMC2P35998 433 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PNPLA4P41247 253 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AARSP49588 968 aaKnown RBP eCLIP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 EPHB4P54760 987 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GYS2P54840 703 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SUMO1P63165 101 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TPM4P67936 248 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DEFB103AP81534 67 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SMAD3P84022 425 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CYP24A1Q07973 514 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DSC1Q08554 894 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BFSP1Q12934 665 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DUSP4Q13115 394 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ADAM9Q13443 819 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TUSC3Q13454 348 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SQSTM1Q13501 440 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CBX2Q14781 532 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PSMD6Q15008 389 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 IQCB1Q15051 598 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NAB2Q15742 525 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RAB30Q15771 203 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZBTB6Q15916 424 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SNRNP35Q16560 246 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TCTN1Q2MV58 587 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LRIT3Q3SXY7 679 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZACNQ401N2 412 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NOMO2Q5JPE7 1267 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANKRD40Q6AI12 368 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 IQCEQ6IPM2 695 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KLHL10Q6JEL2 608 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GLB1LQ6UWU2 654 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CRELD2Q6UXH1 353 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ALKAL1Q6UXT8 129 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF574Q6ZN55 896 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C15orf39Q6ZRI6 1047 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 EP400NLQ6ZTU2 488 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C11orf57Q6ZUT1 292 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF365Q70YC5 407 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SPRED2Q7Z698 418 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FRMD5Q7Z6J6 570 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DEFB128Q7Z7B8 93 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RTN4RL1Q86UN2 441 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 WDR49Q8IV35 697 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HERC6Q8IVU3 1022 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAM114A1Q8IWE2 563 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NELFCDQ8IXH7 590 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PPIL6Q8IXY8 311 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RNF168Q8IYW5 571 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TDHQ8IZJ6 230 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ABI1Q8IZP0 508 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LRRC43Q8N309 656 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 OXR1Q8N573 874 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CSGALNACT2Q8N6G5 542 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LRRC52Q8N7C0 313 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF513Q8N8E2 541 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM145Q8NBT3 493 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GSTCDQ8NEC7 633 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANKRD20A12PQ8NF67 263 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CXorf38Q8TB03 319 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SPATA18Q8TC71 538 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 URGCPQ8TCY9 931 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PARD3BQ8TEW8 1205 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NELFBQ8WX92 580 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DPF3Q92784 378 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DIO2Q92813 273 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ERCC4Q92889 916 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HPS3Q969F9 1004 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC35C1Q96A29 364 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BORCS6Q96GS4 357 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CCDC120Q96HB5 630 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CPB2Q96IY4 423 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF668Q96K58 619 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZBTB45Q96K62 511 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CNOT6LQ96LI5 555 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MAGEB10Q96LZ2 347 aaPredicted RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZNF560Q96MR9 790 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UROC1Q96N76 676 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PTCHD1Q96NR3 888 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SAMD11Q96NU1 681 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ACAP3Q96P50 834 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PPP1R10Q96QC0 940 aaKnown RBP2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MED15Q96RN5 788 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RPS6KC1Q96S38 1066 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PPP1R16BQ96T49 567 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RAD9AQ99638 391 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CGRRF1Q99675 332 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAM213AQ9BRX8 229 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM175Q9BSA9 504 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TCHPQ9BT92 498 aa2.36□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MSTO1Q9BUK6 570 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms