RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 IZUMO3Q5VZ72 239 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 SRLQ86TD4 932 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 FAM186BQ8IYM0 893 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 OR2C3Q8N628 320 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 METTL25Q8N6Q8 603 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 MBD3L2Q8NHZ7 208 aaPredicted RBP5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 ZNF566Q969W8 418 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 CCDC17Q96LX7 622 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 FYTTD1Q96QD9 318 aaKnown RBP5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 SELENOOQ9BVL4 669 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 CERS4Q9HA82 394 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 AS3MTQ9HBK9 375 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 VPS51Q9UID3 782 aa5.68□□□□□ -1.5
SMARCA5-203ENST00000515531 A0A087WZ62 844 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 POC1B-GALNT4F8VUJ3 575 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 FBLP22087 321 aaKnown RBP5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 TFF2Q03403 129 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 GPS1Q13098 491 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 CCDC142Q17RM4 750 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 CERKLQ49MI3 558 aaPredicted RBP5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 C4orf46Q504U0 113 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 MRNIPQ6NTE8 343 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 FBXO38Q6PIJ6 1188 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 KRT73Q86Y46 540 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 GALNT4Q8N4A0 578 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 HS6ST2Q96MM7 605 aa5.67□□□□□ -1.5
SMARCA5-203ENST00000515531 KCNQ3O43525 872 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 WDR47O94967 919 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 NDST3O95803 873 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 MT-CO3P00414 261 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 ZNF37AP17032 561 aaPredicted RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 ADRA1DP25100 572 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 EEF1GP26641 437 aaKnown RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 HDAC1Q13547 482 aaPredicted RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 KIAA1614Q5VZ46 1190 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 TMEM65Q6PI78 240 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 BCDIN3DQ7Z5W3 292 aaKnown RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 CHSY1Q86X52 802 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 P3H2Q8IVL5 708 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 CCDC28AQ8IWP9 274 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 FAM71DQ8N9W8 422 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 WDYHV1Q96HA8 205 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 ASB2Q96Q27 587 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 ELAC2Q9BQ52 826 aaKnown RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 PCDHAC1Q9H158 963 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 NLRC4Q9NPP4 1024 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 COL15A1P39059 1388 aa5.66□□□□□ -1.5
SMARCA5-203ENST00000515531 PRRT4C9JH25 899 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 BTBD19C9JJ37 291 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 ZSCAN9O15535 394 aaPredicted RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 CHRM5P08912 532 aaPredicted RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 NHLRC4P0CG21 123 aaPredicted RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 TXNL4AP83876 142 aaKnown RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 BTKQ06187 659 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 KRTAP1-1Q07627 177 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 SRSF4Q08170 494 aaKnown RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 FAM187BQ17R55 369 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 SLC35G1Q2M3R5 365 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 ZNF782Q6ZMW2 699 aaPredicted RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 KIAA0408Q6ZU52 694 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 C12orf76Q8N812 135 aaPredicted RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 PNPLA1Q8N8W4 532 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 GLIS1Q8NBF1 620 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 SUN3Q8TAQ9 357 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 DPF1Q92782 380 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 GRAMD1AQ96CP6 724 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 CINPQ9BW66 212 aaPredicted RBP5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 USP29Q9HBJ7 922 aa5.65□□□□□ -1.5
SMARCA5-203ENST00000515531 FNDC1Q4ZHG4 1894 aaPredicted RBP5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 FAM234BA2RU67 622 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 TISP43B9A030 160 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 HNRNPDLO14979 420 aaKnown RBP5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 CYP2D6P10635 497 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 CERS1P27544 350 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 GABRB3P28472 473 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 MCM5P33992 734 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 DGKQP52824 942 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 DEUP1Q05D60 604 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 RAP1GAP2Q684P5 730 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 ABLIM2Q6H8Q1 611 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 DDB2Q92466 427 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 RITA1Q96K30 269 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 RGL1Q9NZL6 768 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 ASAP1Q9ULH1 1129 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 FRMD4BQ9Y2L6 1034 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 PCDHGB2Q9Y5G2 931 aa5.64□□□□□ -1.51
SMARCA5-203ENST00000515531 TCRBV5S1A1TA0A578 114 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 PODXLO00592 558 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 CA12O43570 354 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 USP1O94782 785 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 VIPP01282 170 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 SRGAP2BP0DMP2 458 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 ARP10275 920 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 EGR1P18146 543 aa5.63□□□□□ -1.51
SMARCA5-203ENST00000515531 MST1P26927 711 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms