RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 BSPRYQ5W0U4 402 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 MSANTD2Q6P1R3 559 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 DNAJC24Q6P3W2 148 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 GAREM2Q75VX8 874 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 ACRBPQ8NEB7 543 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 CLEC4CQ8WTT0 213 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 RFFLQ8WZ73 363 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 SMG7Q92540 1137 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 NT5C3BQ969T7 300 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 PIWIL1Q96J94 861 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 NMUR1Q9HB89 426 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 DNMT3BQ9UBC3 853 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 COG5Q9UP83 839 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■■■□ 25.8
PDLIM5-220ENST00000514830 EYSQ5T1H1 3165 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 BDP1A6H8Y1 2624 aa12.55□□□□□ -0.4
PDLIM5-220ENST00000514830 DOCK8Q8NF50 2099 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 RCCD1A6NED2 376 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 TMEM191CA6NGB0 347 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 C2CD4BA6NLJ0 364 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 PIK3R2O00459 728 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 DPYSL4O14531 572 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 OLFM2O95897 454 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 OAS1P00973 400 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 RHOP08100 348 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 ABCB4P21439 1286 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 NOS2P35228 1153 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 MATKP42679 507 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 PTPN9P43378 593 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 KIF5AQ12840 1032 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 ACAP1Q15027 740 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 RARS2Q5T160 578 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 FAM102AQ5T9C2 384 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 BNIPLQ7Z465 357 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 TADA2BQ86TJ2 420 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 SMRP1Q8NCR6 262 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 STKLD1Q8NE28 680 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 GOLGA1Q92805 767 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 ARHGEF26Q96DR7 871 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 PGAP3Q96FM1 320 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 DDX23Q9BUQ8 820 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 SELENOOQ9BVL4 669 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 WDR6Q9NNW5 1121 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 OLA1Q9NTK5 396 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 CLDND1Q9NY35 253 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 GMIPQ9P107 970 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 MAGED2Q9UNF1 606 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 PPP2R2CQ9Y2T4 447 aa12.54□□□□□ -0.4
PDLIM5-220ENST00000514830 A0A1W2PQH9 124 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 CCP110O43303 1012 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 ZSCAN12O43309 604 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 MOSPD3O75425 235 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 ENDOD1O94919 500 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 RALAP11233 206 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 GABRR2P28476 465 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 MTHFRP42898 656 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 PGFP49763 221 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 DLX2Q07687 328 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 NNTQ13423 1086 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 TAF5Q15542 800 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 BTBD8Q5XKL5 378 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 CES5AQ6NT32 575 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 PDZD4Q76G19 769 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 GRASPQ7Z6J2 395 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 RNF10Q8N5U6 811 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 C12orf76Q8N812 135 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 NIPA2Q8N8Q9 360 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 SLC35G2Q8TBE7 412 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 UBE2Q2Q8WVN8 375 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 SUSD6Q92537 303 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 MRPS31Q92665 395 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 CENPIQ92674 756 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 RIPOR3Q96MK2 946 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 NECTIN4Q96NY8 510 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 GCNAQ96QF7 691 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 LACRTQ9GZZ8 138 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 METTL5Q9NRN9 209 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-220ENST00000514830 GOLGA8SH3BPF8 625 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms