RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 SMOQ99835 787 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 AGPAT1Q99943 283 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 SEPT11Q9NVA2 429 aaKnown RBP21.2■□□□□ 0.98
USP53-208ENST00000514305 FBXO4Q9UKT5 387 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 A0A1W2PRU2 124 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 SLC38A8A6NNN8 435 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 MFAP3LO75121 409 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 MOSPD3O75425 235 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 TARSP26639 723 aaKnown RBP21.19■□□□□ 0.98
USP53-208ENST00000514305 GDI1P31150 447 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
USP53-208ENST00000514305 PDE4CQ08493 712 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 ARID5BQ14865 1188 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 ZNF528Q3MIS6 628 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 TAF3Q5VWG9 929 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 VITQ6UXI7 678 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 NOP9Q86U38 636 aaKnown RBP21.19■□□□□ 0.98
USP53-208ENST00000514305 TTC30AQ86WT1 665 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 PDZD8Q8NEN9 1154 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 SHKBP1Q8TBC3 707 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 KCTD13Q8WZ19 329 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 TRMT2BQ96GJ1 504 aaKnown RBP21.19■□□□□ 0.98
USP53-208ENST00000514305 KCNK16Q96T55 309 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 DNAJC7Q99615 494 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 TRPV4Q9HBA0 871 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 ZMYM5Q9UJ78 669 aa21.19■□□□□ 0.98
USP53-208ENST00000514305 NUP210Q8TEM1 1887 aaPredicted RBP21.19■□□□□ 0.98
USP53-208ENST00000514305 COL4A2P08572 1712 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 NRG2O14511 850 aaPredicted RBP21.18■□□□□ 0.98
USP53-208ENST00000514305 ZNF263O14978 683 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 SOAT2O75908 522 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 ATF6P18850 670 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 YWHAQP27348 245 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 CDC25CP30307 473 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 VIPR2P41587 438 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 GPD2P43304 727 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 RPS9P46781 194 aaKnown RBP21.18■□□□□ 0.98
USP53-208ENST00000514305 CDR1P51861 262 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 GSDMDP57764 484 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 PKDCCQ504Y2 493 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 PIGZQ86VD9 579 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 TMC8Q8IU68 726 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 YAF2Q8IY57 180 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 SIX6OS1Q8N1H7 587 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 IPO4Q8TEX9 1081 aaKnown RBP21.18■□□□□ 0.98
USP53-208ENST00000514305 SLC35F5Q8WV83 523 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 OVCA2Q8WZ82 227 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 SECISBP2LQ93073 1101 aaKnown RBP21.18■□□□□ 0.98
USP53-208ENST00000514305 CLDN23Q96B33 292 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 HINFPQ9BQA5 517 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 DEF6Q9H4E7 631 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 HAUS4Q9H6D7 363 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 SYNCQ9H7C4 482 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 ACP6Q9NPH0 428 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 TRPV5Q9NQA5 729 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 ST7Q9NRC1 585 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 ABHD10Q9NUJ1 306 aa21.18■□□□□ 0.98
USP53-208ENST00000514305 NOCTQ9UK39 431 aaKnown RBP21.18■□□□□ 0.98
USP53-208ENST00000514305 MAGED2Q9UNF1 606 aaPredicted RBP21.18■□□□□ 0.98
USP53-208ENST00000514305 SART1O43290 800 aaKnown RBP21.17■□□□□ 0.98
USP53-208ENST00000514305 NRDCO43847 1150 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 FBXO21O94952 628 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 MMEP08473 750 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 SLC5A3P53794 718 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 CSTF1Q05048 431 aaKnown RBP21.17■□□□□ 0.98
USP53-208ENST00000514305 MFSD6LQ8IWD5 586 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 MAML2Q8IZL2 1156 aaPredicted RBP21.17■□□□□ 0.98
USP53-208ENST00000514305 ARHGAP18Q8N392 663 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 DDX1Q92499 740 aaKnown RBP21.17■□□□□ 0.98
USP53-208ENST00000514305 MYRFLQ96LU7 910 aa21.17■□□□□ 0.98
USP53-208ENST00000514305 ZNF334Q9HCZ1 680 aaPredicted RBP21.17■□□□□ 0.98
USP53-208ENST00000514305 NDRG2Q9UN36 371 aaKnown RBP21.17■□□□□ 0.98
USP53-208ENST00000514305 HEPACAM2A8MVW5 462 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 BEST1O76090 585 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 CDH5P33151 784 aaPredicted RBP21.16■□□□□ 0.98
USP53-208ENST00000514305 ADKP55263 362 aaKnown RBP21.16■□□□□ 0.98
USP53-208ENST00000514305 ARHGAP15Q53QZ3 475 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 DENND1BQ6P3S1 775 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 ERICH1Q86X53 443 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 STKLD1Q8NE28 680 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 ZMIZ2Q8NF64 920 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 CSGALNACT1Q8TDX6 532 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 GOLGA1Q92805 767 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 FBXO32Q969P5 355 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 ZSWIM1Q9BR11 485 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 TRIM62Q9BVG3 475 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 TTLL2Q9BWV7 592 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 LRRC3Q9BY71 257 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 CNGB3Q9NQW8 809 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 TRPM5Q9NZQ8 1165 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 PIAS3Q9Y6X2 628 aa21.16■□□□□ 0.98
USP53-208ENST00000514305 SSU72P8A0A1W2PR75 194 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 DPYSL4O14531 572 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 NSFP46459 744 aaKnown RBP21.15■□□□□ 0.98
USP53-208ENST00000514305 GPR15P49685 360 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 KIF11P52732 1056 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 CACNA2D1P54289 1103 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 CDK17Q00537 523 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 FMO1Q01740 532 aa21.15■□□□□ 0.98
USP53-208ENST00000514305 SDHAF4Q5VUM1 108 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms