RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 PM20D1Q6GTS8 502 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 HFE2Q6ZVN8 426 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 RALGPS2Q86X27 583 aaPredicted RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 DHX40Q8IX18 779 aaKnown RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 FAM71AQ8IYT1 594 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 SIX5Q8N196 739 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 SIX6OS1Q8N1H7 587 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 ARL14EPQ8N8R7 260 aaPredicted RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 SCAMP5Q8TAC9 235 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 SLC35F5Q8WV83 523 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 OSCP1Q8WVF1 389 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 IRGQQ8WZA9 623 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 TSC1Q92574 1164 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 KAT5Q92993 513 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 ATP2A3Q93084 1043 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 NOX5Q96PH1 765 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 STK33Q9BYT3 514 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 LHX5Q9H2C1 402 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 TAB2Q9NYJ8 693 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 GMIPQ9P107 970 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 TBC1D14Q9P2M4 693 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 DNAJC12Q9UKB3 198 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 HCN4Q9Y3Q4 1203 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 CEP83Q9Y592 693 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 A0A1W2PQC6 194 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 KANSL1LA0AUZ9 987 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 E2F8A0AVK6 867 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 KRBA1A5PL33 1030 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 F8VZ95 297 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 M0QYV0 167 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
NEDD4-210ENST00000513957 CYP26A1O43174 497 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 COCHO43405 550 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 NFATC1O95644 943 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 ZBED1O96006 694 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 AOC1P19801 751 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 BRD2P25440 801 aaKnown RBP8.6□□□□□ -1.03
NEDD4-210ENST00000513957 SERPINB4P48594 390 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 TKTL1P51854 596 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 GRM2Q14416 872 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 ZSCAN23Q3MJ62 389 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 SLC44A4Q53GD3 710 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 HSP90AA4PQ58FG1 418 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 DPY19L2P1Q6NXN4 242 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 ZNF852Q6ZMS4 543 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 BEND5Q7L4P6 421 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 GPRIN1Q7Z2K8 1008 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 ZNF677Q86XU0 584 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 CPA6Q8N4T0 437 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 PJA1Q8NG27 643 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 SH3RF2Q8TEC5 729 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 ZNF606Q8WXB4 792 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 TFAP2BQ92481 460 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 GOLGA1Q92805 767 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 IQCDQ96DY2 449 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 FAM83CQ9BQN1 747 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 LSM14BQ9BX40 385 aaKnown RBP8.6□□□□□ -1.03
NEDD4-210ENST00000513957 NAA15Q9BXJ9 866 aaKnown RBP8.6□□□□□ -1.03
NEDD4-210ENST00000513957 PLA2G2FQ9BZM2 168 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 NACA2Q9H009 215 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 MIS12Q9H081 205 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 IRF2BPLQ9H1B7 796 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 VPS16Q9H269 839 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 HSD3B7Q9H2F3 369 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 SMOC2Q9H3U7 446 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 ABCC13Q9NSE7 274 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
NEDD4-210ENST00000513957 TMEM51Q9NW97 253 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 DNMT3LQ9UJW3 386 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 CA14Q9ULX7 337 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 MYO6Q9UM54 1294 aa8.6□□□□□ -1.03
NEDD4-210ENST00000513957 GOLGA6L19H0YKK7 550 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 LEFTY2O00292 366 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 THAP12O43422 761 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 LSM8O95777 96 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ABL1P00519 1130 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 MBL2P11226 248 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 RARGP13631 454 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 EIF2DP41214 584 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 GPD2P43304 727 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 RPS9P46781 194 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 IFNAR2P48551 515 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 KPNA1P52294 538 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 COG7P83436 770 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 UBXN1Q04323 297 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ADIGQ0VDE8 80 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 NR1H3Q13133 447 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 RUNX3Q13761 415 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 RAPGEF1Q13905 1077 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 DRAP1Q14919 205 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 IQCB1Q15051 598 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ARHGAP44Q17R89 818 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ITPRIPL2Q3MIP1 535 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 PREPLQ4J6C6 727 aaPredicted RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 GJB7Q6PEY0 223 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 TPRG1Q6ZUI0 275 aa8.59□□□□□ -1.03
NEDD4-210ENST00000513957 APTXQ7Z2E3 356 aaKnown RBP8.59□□□□□ -1.03
NEDD4-210ENST00000513957 ZDHHC17Q8IUH5 632 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms