RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FUBP3Q96I24 572 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP46-208ENST00000512656 MYRFLQ96LU7 910 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 CEP295NLQ96MC4 621 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 CLIC6Q96NY7 704 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 FAM83CQ9BQN1 747 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 PANK2Q9BZ23 570 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 CUEDC2Q9H467 287 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 EHD2Q9NZN4 543 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 L1RE1Q9UN81 338 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 MAGED2Q9UNF1 606 aaPredicted RBP7.69□□□□□ -1.18
USP46-208ENST00000512656 SNX9Q9Y5X1 595 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 TICRRQ7Z2Z1 1910 aa7.69□□□□□ -1.18
USP46-208ENST00000512656 SCN1AP35498 2009 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 TRAV19A0A0A6YYK7 116 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CCDC163A0A0D9SF12 145 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 FRMD3A2A2Y4 597 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 GOLGA8IPA6NC78 632 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 GOLGA8JA6NMD2 632 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 K7ESF4 209 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TRDMT1O14717 391 aaKnown RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 NOL4O94818 638 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 PRPF6O94906 941 aaKnown RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 CKMP06732 381 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 USP17L7P0C7H9 530 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 DRD1P21728 446 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TGM1P22735 817 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CYP2F1P24903 491 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 NOS3P29474 1203 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 MAGEA11P43364 429 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CDR1P51861 262 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 FAM160A1Q05DH4 1040 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 STK38Q15208 465 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TRIP4Q15650 581 aaPredicted RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 CSRP2Q16527 193 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 DDR2Q16832 855 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 DUOXA2Q1HG44 320 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CFAP221Q4G0U5 840 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 FBXO43Q4G163 708 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TMEM196Q5HYL7 178 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TXNDC8Q6A555 127 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 Q6ZS52 159 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TMEM150AQ86TG1 271 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 SCN4BQ8IWT1 228 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CPA6Q8N4T0 437 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CAMKK1Q8N5S9 505 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 DDX1Q92499 740 aaKnown RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 USP13Q92995 863 aaPredicted RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 ATP2A3Q93084 1043 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 LOXL4Q96JB6 756 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 ZNF396Q96N95 335 aaPredicted RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 USP28Q96RU2 1077 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 CBWD1Q9BRT8 395 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 MTMR12Q9C0I1 747 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 TNMDQ9H2S6 317 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 IKZF4Q9H2S9 585 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 EBF3Q9H4W6 596 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 PCIF1Q9H4Z3 704 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 PDE11AQ9HCR9 933 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TRPC7Q9HCX4 862 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 PARD6AQ9NPB6 346 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 SEMA4GQ9NTN9 838 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 TMLHEQ9NVH6 421 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 INTS13Q9NVM9 706 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 STIM2Q9P246 746 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 MAGEC2Q9UBF1 373 aaPredicted RBP7.68□□□□□ -1.18
USP46-208ENST00000512656 GTF3C4Q9UKN8 822 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 SLC8A2Q9UPR5 921 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 COL4A2P08572 1712 aa7.68□□□□□ -1.18
USP46-208ENST00000512656 NUP210Q8TEM1 1887 aaPredicted RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 SCO2A0A1W2PP80 73 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 J3QW42 95 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 GABRDO14764 452 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 SLC30A4O14863 429 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 EIF3DO15371 548 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP46-208ENST00000512656 STX6O43752 255 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 RPP40O75818 363 aaKnown RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 AKAP3O75969 853 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 FAM163BP0C2L3 166 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 PDIA4P13667 645 aaKnown RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 PFKLP17858 780 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 ACAT1P24752 427 aaKnown RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 ANXA13P27216 316 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 IFNAR2P48551 515 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 NASPP49321 788 aaPredicted RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 CASP5P51878 434 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 SNRPFP62306 86 aaKnown RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 KCNB1Q14721 858 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 MTF1Q14872 753 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 SOWAHAQ2M3V2 549 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 FAM173BQ6P4H8 233 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 VSTM1Q6UX27 236 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 PRR23CQ6ZRP0 262 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 CACNA2D4Q7Z3S7 1137 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 IL22RA1Q8N6P7 574 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 PDILTQ8N807 584 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 IQUBQ8NA54 791 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 OSCP1Q8WVF1 389 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 GAB3Q8WWW8 586 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms