RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 RAB33AQ14088 237 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 TFDP2Q14188 446 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 SMC1AQ14683 1233 aaKnown RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 CCNG2Q16589 344 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 SPOUT1Q5T280 376 aaKnown RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 MSANTD2Q6P1R3 559 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 BBS12Q6ZW61 710 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 CYP4V2Q6ZWL3 525 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 OTOP2Q7RTS6 562 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 TMEM173Q86WV6 379 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 ZNF461Q8TAF7 563 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 GRK7Q8WTQ7 553 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 FAM149B1Q96BN6 582 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 FAF2Q96CS3 445 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 MS4A14Q96JA4 679 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 CFAP57Q96MR6 1250 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 TMEM209Q96SK2 561 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 KCNK16Q96T55 309 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 LBHD1Q9BQE6 289 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 RXFP1Q9HBX9 757 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 ABI2Q9NYB9 513 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-232ENST00000512372 STIM2Q9P246 746 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
NR1I3-232ENST00000512372 LRRD1A4D1F6 860 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 C3orf70A6NLC5 250 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 YJEFN3A6XGL0 299 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 E7ENQ6 273 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 C5orf67F2Z3F1 127 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CAPN9O14815 690 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 IGLV3-25P01717 112 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 RB1P06400 928 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 LINC00271P0C7V0 271 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ACRP10323 421 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CTSAP10619 480 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 SLC2A3P11169 496 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ATF2P15336 505 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 H2AFXP16104 143 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ATP2A2P16615 1042 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ZFXP17010 805 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 KDELR1P24390 212 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CYP2F1P24903 491 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 IL1R2P27930 398 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 SSR1P43307 286 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 DNA2P51530 1060 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ARSEP51690 589 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ROR1Q01973 937 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 PLD1Q13393 1074 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 EIF4EBP2Q13542 120 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CUL1Q13616 776 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 TAF5Q15542 800 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ELF2Q15723 593 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ARL13BQ3SXY8 428 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 DCAF6Q58WW2 860 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 BRMS1LQ5PSV4 323 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 PDE12Q6L8Q7 609 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 DENND5BQ6ZUT9 1274 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 GPRIN1Q7Z2K8 1008 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CCDC50Q8IVM0 306 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 PRELID2Q8N945 189 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 SEC14L1Q92503 715 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 TRMT2BQ96GJ1 504 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 VN1R3Q9BXE9 311 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ANKZF1Q9H8Y5 726 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 NGRNQ9NPE2 291 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 MRPL17Q9NRX2 175 aaKnown RBP9.46□□□□□ -0.9
NR1I3-232ENST00000512372 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 HCSTQ9UBK5 93 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 NR2E3Q9Y5X4 410 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 CDY1Q9Y6F8 540 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 VWA8A3KMH1 1905 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 ALPK3Q96L96 1907 aa9.46□□□□□ -0.9
NR1I3-232ENST00000512372 WDR27A2RRH5 827 aa9.45□□□□□ -0.9
NR1I3-232ENST00000512372 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms