RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ZNF558Q96NG5 402 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 RUNDC3BQ96NL0 473 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 TBCBQ99426 244 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CARD6Q9BX69 1037 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 TSPAN10Q9H1Z9 355 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-230ENST00000511944 CWH43Q9H720 699 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NR1I3-230ENST00000511944 COL4A4P53420 1690 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 SLC35F4A4IF30 521 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 NCK2O43639 380 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 TBC1D4O60343 1298 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 RNF8O76064 485 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 ITGB1P05556 798 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 GPD1P21695 349 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 ADORA2BP29275 332 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 AIF1P55008 147 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 TMEM214Q6NUQ4 689 aaKnown RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 UBXN4Q92575 508 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 ALG3Q92685 438 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 MYLPFQ96A32 169 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 RNPC3Q96LT9 517 aaKnown RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 SLC9A7Q96T83 725 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 TTPALQ9BTX7 342 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
NR1I3-230ENST00000511944 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
NR1I3-230ENST00000511944 UQCRHLA0A096LP55 91 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 MYBPHLA2RUH7 354 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 ATP2C2O75185 946 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 DAB1O75553 588 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 C1RP00736 705 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 FGBP02675 491 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SOD2P04179 222 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 UQCRHP07919 91 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 PSMA2P25787 234 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SDC4P31431 198 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 MATKP42679 507 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 ZNF135P52742 658 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 ZNF252P-AS1Q0IIN9 211 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 GPR17Q13304 367 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 CYP4A22Q5TCH4 519 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 OR6B2Q6IFH4 312 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 KCNT2Q6UVM3 1135 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SPATA2LQ8IUW3 424 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 RCOR2Q8IZ40 523 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 EIF1ADQ8N9N8 165 aaKnown RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SPATA4Q8NEY3 305 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 HERVK_113Q902F9 699 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 CENPIQ92674 756 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 PGAP3Q96FM1 320 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 IGSF21Q96ID5 467 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SLC2A13Q96QE2 648 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SMOQ99835 787 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 C11orf84Q9BUA3 381 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 DDX23Q9BUQ8 820 aaKnown RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 HERC2P3Q9BVR0 1158 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 FRMD8P1Q9BZ68 369 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 SLITRK6Q9H5Y7 841 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 POPDC2Q9HBU9 364 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.52□□□□□ -0.89
NR1I3-230ENST00000511944 CHST7Q9NS84 486 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 MTRRQ9UBK8 725 aa9.52□□□□□ -0.89
NR1I3-230ENST00000511944 CACNG4Q9UBN1 327 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms