RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 BBS7Q8IWZ6 715 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 NUP93Q8N1F7 819 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 BAP1Q92560 729 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 ZFRQ96KR1 1074 aaKnown RBP12.3□□□□□ -0.44
RNF4-216ENST00000511859 SLC6A17Q9H1V8 727 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 ZHX3Q9H4I2 956 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 DNAJC17Q9NVM6 304 aaKnown RBP12.3□□□□□ -0.44
RNF4-216ENST00000511859 WDR35Q9P2L0 1181 aa12.3□□□□□ -0.44
RNF4-216ENST00000511859 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.3□□□□□ -0.446e-6■■■■■ 55.1
RNF4-216ENST00000511859 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 TMEM131Q92545 1883 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 PRRT4C9JH25 899 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 NPC1O15118 1278 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 COCHO43405 550 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 PCDHGA12O60330 932 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 CACNG3O60359 315 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 TBCAO75347 108 aaKnown RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 RTN3O95197 1032 aaPredicted RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 KRT18P05783 430 aaKnown RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 PDGFRBP09619 1106 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 JUPP14923 745 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 YWHAQP27348 245 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 HNF1BP35680 557 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 TUBP50607 506 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 AFF3P51826 1226 aaKnown RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 HMGN5P82970 282 aaKnown RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 STARD3Q14849 445 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 DHRS13Q6UX07 377 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 ZNF720Q7Z2F6 126 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 BRSK2Q8IWQ3 736 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 KBTBD7Q8WVZ9 684 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 NUP58Q9BVL2 599 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 PCED1AQ9H1Q7 454 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 EIF2B4Q9UI10 523 aaKnown RBP12.29□□□□□ -0.44
RNF4-216ENST00000511859 BTBD3Q9Y2F9 522 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 PCDHGA1Q9Y5H4 931 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 RAD54BQ9Y620 910 aa12.29□□□□□ -0.44
RNF4-216ENST00000511859 MYLKQ15746 1914 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 WASH3PC4AMC7 463 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 TYRP14679 529 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
RNF4-216ENST00000511859 CSNK1EP49674 416 aaKnown RBP12.28□□□□□ -0.44
RNF4-216ENST00000511859 TPMTP51580 245 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 NEK4P51957 841 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
RNF4-216ENST00000511859 TEAD4Q15561 434 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 ARL6IP4Q66PJ3 421 aaKnown RBP12.28□□□□□ -0.44
RNF4-216ENST00000511859 HTR3DQ70Z44 454 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 FAM184AQ8NB25 1140 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 ERLEC1Q96DZ1 483 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 AK8Q96MA6 479 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 BBS2Q9BXC9 721 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 OSGEPQ9NPF4 335 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 CHORDC1Q9UHD1 332 aaPredicted RBP12.28□□□□□ -0.44
RNF4-216ENST00000511859 SIX4Q9UIU6 781 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 EXOC7Q9UPT5 735 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 AK5Q9Y6K8 562 aa12.28□□□□□ -0.44
RNF4-216ENST00000511859 MUC22E2RYF6 1773 aaPredicted RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 A0A1B0GVT2 93 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 VWA3AA6NCI4 1184 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 KCNJ18B7U540 433 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 NEDD8-MDP1E9PL57 170 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 TLX3O43711 291 aaPredicted RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 DFNA5O60443 496 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 IGLV3-19P01714 112 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 C1SP09871 688 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 TMEM191BP0C7N4 346 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 GNL1P36915 607 aaPredicted RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 DGKGP49619 791 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 WNT7BP56706 349 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 SEMG2Q02383 582 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 IFRD2Q12894 506 aaPredicted RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 RTP5Q14D33 572 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 E2F5Q15329 346 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
RNF4-216ENST00000511859 KIF19Q2TAC6 998 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 INAVAQ3KP66 663 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 FUT11Q495W5 492 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 CCDC157Q569K6 752 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 RILPL1Q5EBL4 403 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 SCARA3Q6AZY7 606 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 TMPRSS6Q8IU80 811 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 IGSF8Q969P0 613 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 FBXO32Q969P5 355 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 WBP1Q96G27 269 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 HPDLQ96IR7 371 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 ANKRD36BP1Q96IX9 119 aa12.27□□□□□ -0.45
RNF4-216ENST00000511859 NRSN2Q9GZP1 204 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms