RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 GABRG3Q99928 467 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 GPR174Q9BXC1 333 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 BBS2Q9BXC9 721 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 TRIM9Q9C026 710 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 GAREM1Q9H706 876 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 GMIPQ9P107 970 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 STARD13Q9Y3M8 1113 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 CFAP46Q8IYW2 2715 aa14.03□□□□□ -0.16
POLR2J3-216ENST00000511773 TENM4Q6N022 2769 aa14.02□□□□□ -0.16
POLR2J3-216ENST00000511773 FAM149AA5PLN7 773 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 TRABD2BA6NFA1 517 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 WASH3PC4AMC7 463 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 PRRT4C9JH25 899 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 CILPO75339 1184 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 RTN3O95197 1032 aaPredicted RBP14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 CER1O95813 267 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 TYRP14679 529 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 IDEP14735 1019 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 GAP43P17677 238 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 USP49Q70CQ1 688 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 CBWD2Q8IUF1 395 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 BHMTQ93088 406 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 EPSTI1Q96J88 318 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 XPO6Q96QU8 1125 aaKnown RBP14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 KCNK16Q96T55 309 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 B3GNT5Q9BYG0 378 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 TM7SF3Q9NS93 570 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 TOR4AQ9NXH8 423 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 PCDHB13Q9Y5F0 798 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 KNL1Q8NG31 2342 aa14.02□□□□□ -0.17
POLR2J3-216ENST00000511773 CACNG3O60359 315 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 MATKP42679 507 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 SLC5A3P53794 718 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 TNNC1P63316 161 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 HLA-BQ31612 363 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 DCAF12L1Q5VU92 463 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 CACUL1Q86Y37 369 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 B3GALNT2Q8NCR0 500 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 PIP4K2CQ8TBX8 421 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 RHBDD1Q8TEB9 315 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 OVCA2Q8WZ82 227 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 MED10Q9BTT4 135 aa14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 KIAA1522Q9P206 1035 aaPredicted RBP14.01□□□□□ -0.17
POLR2J3-216ENST00000511773 SHROOM3Q8TF72 1996 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 ZNF462Q96JM2 2506 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 ZNF233A6NK53 670 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 A8MXQ7 604 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 BCAT2O15382 392 aaPredicted RBP14□□□□□ -0.17
POLR2J3-216ENST00000511773 CLSTN1O94985 981 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 DLATP10515 647 aaKnown RBP14□□□□□ -0.17
POLR2J3-216ENST00000511773 GJB2P29033 226 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 DGKGP49619 791 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 TUBP50607 506 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 BNC1Q01954 994 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 C19orf57Q0VDD7 668 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 STARD3Q14849 445 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
POLR2J3-216ENST00000511773 WDR72Q3MJ13 1102 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 FUT11Q495W5 492 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 DNASE2BQ8WZ79 361 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 SNX19Q92543 992 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 DNAJC19Q96DA6 116 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 CDC6Q99741 560 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 WSB2Q9NYS7 404 aaPredicted RBP14□□□□□ -0.17
POLR2J3-216ENST00000511773 DKK4Q9UBT3 224 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 NXF1Q9UBU9 619 aaKnown RBP14□□□□□ -0.17
POLR2J3-216ENST00000511773 STK17AQ9UEE5 414 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 EIF2B4Q9UI10 523 aaKnown RBP14□□□□□ -0.17
POLR2J3-216ENST00000511773 WDR3Q9UNX4 943 aaKnown RBP eCLIP14□□□□□ -0.17
POLR2J3-216ENST00000511773 BTBD3Q9Y2F9 522 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 STON1Q9Y6Q2 735 aa14□□□□□ -0.17
POLR2J3-216ENST00000511773 CABIN1Q9Y6J0 2220 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 ATP8B3O60423 1300 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 A0A1B0GVT2 93 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 FLRT2O43155 660 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 TLR5O60602 858 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 TACC1O75410 805 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 TBX18O95935 607 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 BMP15O95972 392 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 CST3P01034 146 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 ZNF883P0CG24 379 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 PGFP49763 221 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 SV2BQ7L1I2 683 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 TRAPPC11Q7Z392 1133 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 FAM35AQ86V20 835 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 WDR49Q8IV35 697 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 GALNT15Q8N3T1 639 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 BAHD1Q8TBE0 780 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 UBL7Q96S82 380 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 MKRN2Q9H000 416 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 OLFML3Q9NRN5 406 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 PLK2Q9NYY3 685 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 CCDC39Q9UFE4 941 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 TMEM131Q92545 1883 aa13.99□□□□□ -0.17
POLR2J3-216ENST00000511773 MYH10P35580 1976 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms