RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ATP1A3P13637 1013 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 ZNF18P17022 549 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 GJA4P35212 333 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 PSEN1P49768 467 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 MLLT6P55198 1093 aaPredicted RBP14.67□□□□□ -0.06
DDX41-212ENST00000511040 EFEMP1Q12805 493 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 FKBP15Q5T1M5 1219 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 PM20D1Q6GTS8 502 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 RSRC2Q7L4I2 434 aaKnown RBP14.67□□□□□ -0.06
DDX41-212ENST00000511040 PASD1Q8IV76 773 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 BBS7Q8IWZ6 715 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 DHX40Q8IX18 779 aaKnown RBP14.67□□□□□ -0.06
DDX41-212ENST00000511040 ARHGAP18Q8N392 663 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 ANKRD20A12PQ8NF67 263 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 CLEC4CQ8WTT0 213 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 EDEM1Q92611 657 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 CLDN23Q96B33 292 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 MSANTD3Q96H12 275 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 FUCA2Q9BTY2 467 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 OSBPL6Q9BZF3 934 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 MIS12Q9H081 205 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 ST7Q9NRC1 585 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 CLIC5Q9NZA1 410 aa14.67□□□□□ -0.06
DDX41-212ENST00000511040 E2F8A0AVK6 867 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 FAM170AA1A519 330 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 YJEFN3A6XGL0 299 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 LGALS16A8MUM7 142 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 E7ENQ6 273 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 SLC9A3R1O14745 358 aaPredicted RBP14.66□□□□□ -0.06
DDX41-212ENST00000511040 NCAM2O15394 837 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 NFATC1O95644 943 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 CYP17A1P05093 508 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 CHRNB1P11230 501 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 UCHL3P15374 230 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 CLCN1P35523 988 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 GPD2P43304 727 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 PTPN5P54829 565 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 ANGPT1Q15389 498 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 BTBD8Q5XKL5 378 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 TADA2BQ86TJ2 420 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 SLC47A2Q86VL8 602 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 FAM71AQ8IYT1 594 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 PCMTD1Q96MG8 357 aaPredicted RBP14.66□□□□□ -0.06
DDX41-212ENST00000511040 PRRX2Q99811 253 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 BPIFA3Q9BQP9 254 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 KCNH6Q9H252 994 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 GANQ9H2C0 597 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 FBRSL1Q9HCM7 1045 aaKnown RBP14.66□□□□□ -0.06
DDX41-212ENST00000511040 CNGB3Q9NQW8 809 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 FAM207AQ9NSI2 230 aaPredicted RBP14.66□□□□□ -0.06
DDX41-212ENST00000511040 FAM86C1Q9NVL1 165 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 MARCH2Q9P0N8 246 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 CYTH4Q9UIA0 394 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 WDFY4Q6ZS81 3184 aa14.66□□□□□ -0.06
DDX41-212ENST00000511040 EPHB6O15197 1021 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 PTMSP20962 102 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 ZNF165P49910 485 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 GALK1P51570 392 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 NUBP1P53384 320 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 DAOAP59103 153 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 UBXN1Q04323 297 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 PTK2Q05397 1052 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 MTAPQ13126 283 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 NR1H3Q13133 447 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 DHCR24Q15392 516 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 SYCP1Q15431 976 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 BSPRYQ5W0U4 402 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 FSTL4Q6MZW2 842 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 KLHDC10Q6PID8 442 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 Q6ZS52 159 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 APTXQ7Z2E3 356 aaKnown RBP14.65□□□□□ -0.06
DDX41-212ENST00000511040 C1orf210Q8IVY1 113 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 SCUBE3Q8IX30 993 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 ADGRG2Q8IZP9 1017 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 NAA15Q9BXJ9 866 aaKnown RBP14.65□□□□□ -0.06
DDX41-212ENST00000511040 PLCB1Q9NQ66 1216 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 TBC1D14Q9P2M4 693 aa14.65□□□□□ -0.06
DDX41-212ENST00000511040 MUC6Q6W4X9 2439 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 SLC12A8A0AV02 714 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 SMTNL1A8MU46 457 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 GREM1O60565 184 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 STC2O76061 302 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 EGFP01133 1207 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 RPS9P46781 194 aaKnown RBP14.64□□□□□ -0.07
DDX41-212ENST00000511040 POLR2FP61218 127 aaKnown RBP14.64□□□□□ -0.07
DDX41-212ENST00000511040 NHLH1Q02575 133 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 GOLGA8FQ08AF8 430 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 GOLGA8DPQ0D2H9 430 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 LRRC32Q14392 662 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 GAB4Q2WGN9 574 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 TMEM196Q5HYL7 178 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 LY6G5CQ5SRR4 150 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 C1orf228Q6PIY5 440 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 RHBDF2Q6PJF5 856 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 WDTC1Q8N5D0 677 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 RNF139Q8WU17 664 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 ATOH1Q92858 354 aaPredicted RBP14.64□□□□□ -0.07
DDX41-212ENST00000511040 HSFY1Q96LI6 401 aa14.64□□□□□ -0.07
DDX41-212ENST00000511040 CDK5RAP1Q96SZ6 601 aaKnown RBP14.64□□□□□ -0.07
DDX41-212ENST00000511040 P2RY13Q9BPV8 354 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms