RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GSCP56915 257 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 ZNF568Q3ZCX4 644 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MTERF2Q49AM1 385 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 CWF19L1Q69YN2 538 aaKnown RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 LPAR1Q92633 364 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SH3BP4Q9P0V3 963 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 RABL2AQ9UBK7 228 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 VAV3Q9UKW4 847 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SNPHO15079 494 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 DHRSXQ8N5I4 330 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ACTRT2Q8TDY3 377 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 DCPSQ96C86 337 aaKnown RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 FAM220BPB1ANY3 271 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MEA1Q16626 185 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 RFX8Q6ZV50 586 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 H3BQF6 201 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MFN2O95140 757 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MSH3P20585 1137 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 COX10Q12887 443 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TMEM132DQ14C87 1099 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 KLHL17Q6TDP4 642 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 DHDDSQ86SQ9 333 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 C6orf62Q9GZU0 229 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 ZSCAN32Q9NX65 697 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SFI1A8K8P3 1242 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 BMP10O95393 424 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MMP14P50281 582 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SLC18A1P54219 525 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 TGM3Q08188 693 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 PAFAH2Q99487 392 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 STK32BQ9NY57 414 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 NTRK1P04629 796 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ALDH5A1P51649 535 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 C16orf72Q14CZ0 275 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 C8orf59Q8N0T1 100 aaPredicted RBP8.62□□□□□ -1.03
HTT-208ENST00000510626 FAM71DQ8N9W8 422 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ANKEF1Q9NU02 776 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 HPSEQ9Y251 543 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 ERVK-24P63145 666 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MROH9Q5TGP6 573 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 COA7Q96BR5 231 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 MTMR12Q9C0I1 747 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 PCYOX1Q9UHG3 505 aa8.62□□□□□ -1.03
HTT-208ENST00000510626 C1orf232A0A0U1RR37 186 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 FBXO21O94952 628 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 IREB2P48200 963 aaKnown RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 TIGD7Q6NT04 549 aaPredicted RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 DEFB107AQ8IZN7 70 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ITPKCQ96DU7 683 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 RNFT2Q96EX2 444 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 USP17L8P0C7I0 530 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 GP5P40197 560 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 C1QBPQ07021 282 aaKnown RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 CLK4Q9HAZ1 481 aaKnown RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 BTG4Q9NY30 223 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 LRRC10BA6NIK2 292 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 H3BMM5 538 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 YWHABP31946 246 aaKnown RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 SMIM11AP58511 58 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 CYP51A1Q16850 503 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 INSCQ1MX18 579 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 SULF1Q8IWU6 871 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ERI2A8K979 691 aaKnown RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 FCHO1O14526 889 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 RAD51BO15315 384 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 SKAP2O75563 359 aaPredicted RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 NCALDP61601 193 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ATP6AP1LQ52LC2 224 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ZNF618Q5T7W0 954 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 DEPDC4Q8N2C3 294 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 FAM111AQ96PZ2 611 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
HTT-208ENST00000510626 OSBPL6Q9BZF3 934 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 METP08581 1390 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 CLTCL1P53675 1640 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 DDHD2O94830 711 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 PGM3O95394 542 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 SLC4A1P02730 911 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ADRA2BP18089 450 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 PROSER3Q2NL68 480 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 OLFML1Q6UWY5 402 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 KIAA0408Q6ZU52 694 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ADGRF4Q8IZF3 695 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ZBED2Q9BTP6 218 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 NT5C1AQ9BXI3 368 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 ZBTB1Q9Y2K1 713 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 HACD1B0YJ81 288 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 NUDT17P0C025 328 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 PON1P27169 355 aa8.61□□□□□ -1.03
HTT-208ENST00000510626 POLD2P49005 469 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms