RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 EMC1Q8N766 993 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 CEP112Q8N8E3 955 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 MICAL1Q8TDZ2 1067 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 HDAC7Q8WUI4 952 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 TRMT2BQ96GJ1 504 aaKnown RBP17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 RBM41Q96IZ5 413 aaKnown RBP17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 BTBD6Q96KE9 485 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 TTLL2Q9BWV7 592 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 ALG13Q9NP73 1137 aaKnown RBP17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 CLIC5Q9NZA1 410 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 USTQ9Y2C2 406 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 YIPF1Q9Y548 306 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 MRFAP1Q9Y605 127 aa17.49■□□□□ 0.39
SCAMP1-203ENST00000510030 C2orf71A6NGG8 1288 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 FSCN2O14926 492 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 ADAM12O43184 909 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 RALAP11233 206 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 NCAM1P13591 858 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 YWHAGP61981 247 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 SMAD3P84022 425 aaKnown RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 GRIN2CQ14957 1233 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 BOLA3Q53S33 107 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 KATNAL2Q8IYT4 538 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 MAFAQ8NHW3 353 aaPredicted RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 CLEC4CQ8WTT0 213 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 RNF139Q8WU17 664 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 CENPIQ92674 756 aaPredicted RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 FBXO32Q969P5 355 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 NT5C3BQ969T7 300 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 PGAP3Q96FM1 320 aaPredicted RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 PIWIL1Q96J94 861 aaKnown RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 KLHL5Q96PQ7 755 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 PBX4Q9BYU1 374 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 TRIM7Q9C029 511 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 GOLPH3Q9H4A6 298 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 PLEKHA4Q9H4M7 779 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 SLC27A5Q9Y2P5 690 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 INSL5Q9Y5Q6 135 aa17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 COL4A4P53420 1690 aaPredicted RBP17.48■□□□□ 0.39
SCAMP1-203ENST00000510030 SLC38A8A6NNN8 435 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 YJEFN3A6XGL0 299 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 E7ENQ6 273 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 LRCH4O75427 683 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 GRAP2O75791 330 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 GJB6O95452 261 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 VNN2O95498 520 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 LRG1P02750 347 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 RDXP35241 583 aaKnown RBP17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 SULT1E1P49888 294 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 COPS2P61201 443 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 ZNF252P-AS1Q0IIN9 211 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 PTPROQ16827 1216 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 CCDC14Q49A88 953 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 PLPP4Q5VZY2 271 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 BSPRYQ5W0U4 402 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 VSIG1Q86XK7 387 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 MAP7D3Q8IWC1 876 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 DEFB106AQ8N104 65 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 ZNF276Q8N554 614 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 STKLD1Q8NE28 680 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 EXD1Q8NHP7 514 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 FAM172AQ8WUF8 416 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 TEKT4Q8WW24 435 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 MAIP1Q8WWC4 291 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 MYRFLQ96LU7 910 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 FBXW11Q9UKB1 542 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 TTC7AQ9ULT0 858 aaPredicted RBP17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 USP18Q9UMW8 372 aa17.47■□□□□ 0.39
SCAMP1-203ENST00000510030 PGRMC1O00264 195 aaKnown RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 FANCGO15287 622 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 TGM5O43548 720 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 NCK2O43639 380 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ENDOD1O94919 500 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 FGF19O95750 216 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ATF6P18850 670 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 KPNA1P52294 538 aaPredicted RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ZNF135P52742 658 aaPredicted RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ERVFC1P60507 584 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 OGDHQ02218 1023 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 IFRD2Q12894 506 aaPredicted RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 NNTQ13423 1086 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 TAF5Q15542 800 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ARL13BQ3SXY8 428 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 PABPC1LQ4VXU2 614 aaKnown RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ZFYVE27Q5T4F4 411 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ACBD5Q5T8D3 534 aaPredicted RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 RSRC2Q7L4I2 434 aaKnown RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 RCOR2Q8IZ40 523 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 SCAMP5Q8TAC9 235 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 ACTRT1Q8TDG2 376 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 AUTS2Q8WXX7 1259 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 CFAP57Q96MR6 1250 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 SERPINB11Q96P15 392 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 NPY6RQ99463 290 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 MTUS1Q9ULD2 1270 aa17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 PACSIN2Q9UNF0 486 aaPredicted RBP17.46■□□□□ 0.39
SCAMP1-203ENST00000510030 YBX2Q9Y2T7 364 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms