RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 NPAS3Q8IXF0 933 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 TDRD5Q8NAT2 981 aaKnown RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 OLIG1Q8TAK6 271 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 ATXN2LQ8WWM7 1075 aaKnown RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 EDEM1Q92611 657 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 ZNF653Q96CK0 615 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 RPGRIP1Q96KN7 1286 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 SLC46A2Q9BY10 475 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 POPDC2Q9HBU9 364 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 OLA1Q9NTK5 396 aaKnown RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 ASNSD1Q9NWL6 643 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 MYO1AQ9UBC5 1043 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 CNOT8Q9UFF9 292 aaKnown RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 USTQ9Y2C2 406 aa15.54■□□□□ 0.08
RNF4-213ENST00000509388 EPN1Q9Y6I3 576 aaPredicted RBP15.54■□□□□ 0.08
RNF4-213ENST00000509388 PTPRDP23468 1912 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 C2orf78A6NCI8 922 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 SOWAHDA6NJG2 315 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 DPYSL4O14531 572 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 GRAP2O75791 330 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 H2AFZP0C0S5 128 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 MBL2P11226 248 aaPredicted RBP15.53■□□□□ 0.08
RNF4-213ENST00000509388 KRT3P12035 628 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 IL9P15248 144 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 RRM1P23921 792 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 SCNN1AP37088 669 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 MAGEA1P43355 309 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 GPC5P78333 572 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 CCDC173Q0VFZ6 552 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 TAF5Q15542 800 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 STXBP5Q5T5C0 1151 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 DCUN1D2Q6PH85 259 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 HFE2Q6ZVN8 426 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 H2AFVQ71UI9 128 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 SLC26A9Q7LBE3 791 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 LRRC8AQ8IWT6 810 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 ARL14EPQ8N8R7 260 aaPredicted RBP15.53■□□□□ 0.08
RNF4-213ENST00000509388 ZSCAN18Q8TBC5 510 aaPredicted RBP15.53■□□□□ 0.08
RNF4-213ENST00000509388 CTNNBL1Q8WYA6 563 aaPredicted RBP15.53■□□□□ 0.08
RNF4-213ENST00000509388 CCSER2Q9H7U1 834 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 MRPL47Q9HD33 250 aaKnown RBP15.53■□□□□ 0.08
RNF4-213ENST00000509388 PARVAQ9NVD7 372 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.53■□□□□ 0.08
RNF4-213ENST00000509388 OSER1Q9NX31 292 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 DNMT3LQ9UJW3 386 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 NUDT5Q9UKK9 219 aa15.53■□□□□ 0.08
RNF4-213ENST00000509388 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.08
RNF4-213ENST00000509388 COCHO43405 550 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 LAMP2P13473 410 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 DESP17661 470 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 FECHP22830 423 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 PGFP49763 221 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 EFEMP1Q12805 493 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 PTP4A2Q12974 167 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 DCAF6Q58WW2 860 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 BEND5Q7L4P6 421 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 BHLHA9Q7RTU4 235 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 CMTM8Q8IZV2 173 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 DEFB106AQ8N104 65 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 C3orf20Q8ND61 904 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 TTC16Q8NEE8 873 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 MYADMQ96S97 322 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 CYP2S1Q96SQ9 504 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.08
RNF4-213ENST00000509388 METTL5Q9NRN9 209 aaKnown RBP15.52■□□□□ 0.08
RNF4-213ENST00000509388 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.52■□□□□ 0.08
RNF4-213ENST00000509388 RASAL2Q9UJF2 1139 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 STAP1Q9ULZ2 295 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 NAALADL1Q9UQQ1 740 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 SCINQ9Y6U3 715 aa15.52■□□□□ 0.08
RNF4-213ENST00000509388 SIGLEC16A6NMB1 481 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 NRG2O14511 850 aaPredicted RBP15.51■□□□□ 0.07
RNF4-213ENST00000509388 DAB1O75553 588 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 NDUFA10O95299 355 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 TBX18O95935 607 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 OAS1P00973 400 aaKnown RBP15.51■□□□□ 0.07
RNF4-213ENST00000509388 NOS2P35228 1153 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 KCNQ1P51787 676 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 GALCP54803 685 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 GSCP56915 257 aaPredicted RBP15.51■□□□□ 0.07
RNF4-213ENST00000509388 KRT83P78385 493 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 KLHDC10Q6PID8 442 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 MIB1Q86YT6 1006 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 ARID3BQ8IVW6 561 aaPredicted RBP15.51■□□□□ 0.07
RNF4-213ENST00000509388 TXLNBQ8N3L3 684 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 ZNF276Q8N554 614 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 SMARCD2Q92925 531 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 PIWIL1Q96J94 861 aaKnown RBP15.51■□□□□ 0.07
RNF4-213ENST00000509388 PDLIM2Q96JY6 352 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 RNF38Q9H0F5 515 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 THAP2Q9H0W7 228 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 ZFP14Q9HCL3 533 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 RRN3Q9NYV6 651 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 MARCH2Q9P0N8 246 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 MYH10P35580 1976 aa15.51■□□□□ 0.07
RNF4-213ENST00000509388 ARHGAP6O43182 974 aa15.5■□□□□ 0.07
RNF4-213ENST00000509388 ATMINO43313 823 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms