RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CSH2P0DML3 217 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CCDC192P0DO97 292 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 P4HA1P13674 534 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ARSAP15289 507 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 WEE1P30291 646 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CDC25CP30307 473 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 GRIK1P39086 918 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MTIF2P46199 727 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 KIF11P52732 1056 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 COPB1P53618 953 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 RPL10AP62906 217 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MYL5Q02045 173 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 FZD5Q13467 585 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 VEPH1Q14D04 833 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ZSCAN23Q3MJ62 389 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 VWA3BQ502W6 1294 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CYP4A22Q5TCH4 519 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 TMEM270Q6UE05 265 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ITIH5Q86UX2 942 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 PIGZQ86VD9 579 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MON1AQ86VX9 555 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CMTM8Q8IZV2 173 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ELMOD1Q8N336 334 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ARL14EPQ8N8R7 260 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MAB21L3Q8N8X9 362 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ZNF511Q8NB15 262 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 PRSS33Q8NF86 280 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 UBA3Q8TBC4 463 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CLEC4CQ8WTT0 213 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 TNIP3Q96KP6 325 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 CYP2S1Q96SQ9 504 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 TUBGCP2Q9BSJ2 902 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MED10Q9BTT4 135 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 DDX23Q9BUQ8 820 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 LSM14BQ9BX40 385 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 IMPG2Q9BZV3 1241 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 NDST4Q9H3R1 872 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ATP13A2Q9NQ11 1180 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ARHGEF3Q9NR81 526 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 ANO10Q9NW15 660 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 DLGAP2Q9P1A6 1054 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 KIAA1522Q9P206 1035 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 IGSF9Q9P2J2 1179 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 APEX2Q9UBZ4 518 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 LIMA1Q9UHB6 759 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MTF2Q9Y483 593 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 F5P12259 2224 aa7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 MUC22E2RYF6 1773 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-207ENST00000509162 A0A1W2PQH9 124 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 GOLGA6L22H0YM25 854 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 PIK3R2O00459 728 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 ZNF197O14709 1029 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 TEX33O43247 280 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 COCHO43405 550 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 TBX18O95935 607 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 FAM200BP0CF97 657 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 CD72P21854 359 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 VARSP26640 1264 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 EEF1GP26641 437 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 SCNN1AP37088 669 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 RPL34P49207 117 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 JAM2P57087 298 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 GAS6Q14393 721 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 MAPRE1Q15691 268 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 ARHGAP44Q17R89 818 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 EXOC3L4Q17RC7 722 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 OTUD1Q5VV17 481 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 SNX30Q5VWJ9 437 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 LCLAT1Q6UWP7 414 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 SFTPA1Q8IWL2 248 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 CCDC105Q8IYK2 499 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 NUP93Q8N1F7 819 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 WDTC1Q8N5D0 677 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 DDX1Q92499 740 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 BAP1Q92560 729 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 SECISBP2LQ93073 1101 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 BPIFA3Q9BQP9 254 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 DUSP16Q9BY84 665 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 ULBP1Q9BZM6 244 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 VPS16Q9H269 839 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 CBX8Q9HC52 389 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 TRPC7Q9HCX4 862 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 UBE2TQ9NPD8 197 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 HEBP1Q9NRV9 189 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 C2orf42Q9NWW7 574 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 SMPD4Q9NXE4 827 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 NUDT5Q9UKK9 219 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 ARHGAP26Q9UNA1 814 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 DOLKQ9UPQ8 538 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 R3HCC1Q9Y3T6 440 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 PCDHB4Q9Y5E5 795 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 WNT6Q9Y6F9 365 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 ZFP37Q9Y6Q3 630 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 MYH10P35580 1976 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 MIA3Q5JRA6 1907 aa7.6□□□□□ -1.19
TOPBP1-207ENST00000509162 PRR33A8MZF0 331 aa7.59□□□□□ -1.19
TOPBP1-207ENST00000509162 F8VZ95 297 aa7.59□□□□□ -1.19
TOPBP1-207ENST00000509162 M0QYV0 167 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms