RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 TATDN2Q93075 761 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 FAXDC2Q96IV6 333 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 HEXIM2Q96MH2 286 aaKnown RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 SMOC1Q9H4F8 434 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 PNPLA8Q9NP80 782 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 RXFP3Q9NSD7 469 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDPN-208ENST00000509009 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 DEC1Q9P2X7 70 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 ACACBO00763 2458 aa13.19□□□□□ -0.3
PDPN-208ENST00000509009 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
PDPN-208ENST00000509009 EPG5Q9HCE0 2579 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 A0A1W2PQH9 124 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 BCLAF3A2AJT9 711 aaKnown RBP13.18□□□□□ -0.3
PDPN-208ENST00000509009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.18□□□□□ -0.3
PDPN-208ENST00000509009 CYP26A1O43174 497 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 ADAM23O75077 832 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 TULP3O75386 442 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 RARGP13631 454 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 MPLP40238 635 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 LIMK1P53667 647 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 KDSRQ06136 332 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 ELF2Q15723 593 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 ANO4Q32M45 955 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 AASDHQ4L235 1098 aaPredicted RBP13.18□□□□□ -0.3
PDPN-208ENST00000509009 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 ANO7Q6IWH7 933 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 KLHDC10Q6PID8 442 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 ZNF276Q8N554 614 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 C12orf50Q8NA57 414 aaPredicted RBP13.18□□□□□ -0.3
PDPN-208ENST00000509009 FBXL13Q8NEE6 735 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 TPSD1Q9BZJ3 242 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 ZDHHC4Q9NPG8 344 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 VPS45Q9NRW7 570 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 DNMT3LQ9UJW3 386 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 HCN2Q9UL51 889 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 USP3Q9Y6I4 520 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 LAMA1P25391 3075 aa13.18□□□□□ -0.3
PDPN-208ENST00000509009 GON4LQ3T8J9 2241 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
PDPN-208ENST00000509009 MDM4O15151 490 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 TRIM24O15164 1050 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 STX10O60499 249 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 ALDH1A2O94788 518 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 CAVIN2O95810 425 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 EPB41P11171 864 aaKnown RBP13.17□□□□□ -0.3
PDPN-208ENST00000509009 GBP1P32455 592 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 MXI1P50539 228 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 RAD23BP54727 409 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 CREB5Q02930 508 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 COBLL1Q53SF7 1204 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
PDPN-208ENST00000509009 ANKRD40Q6AI12 368 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 C11orf74Q86VG3 221 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 TTC30AQ86WT1 665 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 SLC4A11Q8NBS3 891 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 TMEM176AQ96HP8 235 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 WDR35Q9P2L0 1181 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 COQ4Q9Y3A0 265 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 EML5Q05BV3 1969 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
PDPN-208ENST00000509009 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 BCKDHBP21953 392 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 PSEN1P49768 467 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 PMS1P54277 932 aaKnown RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 FKBP3Q00688 224 aaKnown RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 C10orf120Q5SQS8 335 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 NUDT18Q6ZVK8 323 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 CCDC186Q7Z3E2 898 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 TERB1Q8NA31 727 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 RLN3Q8WXF3 142 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 ARID3AQ99856 593 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
PDPN-208ENST00000509009 CLIC5Q9NZA1 410 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 NAGPAQ9UK23 515 aa13.16□□□□□ -0.3
PDPN-208ENST00000509009 LSM7Q9UK45 103 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms