RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ERICH1Q86X53 443 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 ZDHHC14Q8IZN3 488 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 CMTM8Q8IZV2 173 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 SPC24Q8NBT2 197 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 ZNF397Q8NF99 534 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-220ENST00000508715 ZSCAN18Q8TBC5 510 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-220ENST00000508715 EDEM1Q92611 657 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 MRPS31Q92665 395 aaKnown RBP10.85□□□□□ -0.67
PTPN20-220ENST00000508715 C11orf70Q9BRQ4 267 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 TRPV4Q9HBA0 871 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 GDE1Q9NZC3 331 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 EHD2Q9NZN4 543 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 PRKAG3Q9UGI9 489 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 NAGPAQ9UK23 515 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 MUC3AQ02505 3323 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 DOCK4Q8N1I0 1966 aa10.85□□□□□ -0.67
PTPN20-220ENST00000508715 SOBPA7XYQ1 873 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TMCO5BA8MYB1 307 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TLR5O60602 858 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 GRAP2O75791 330 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 FBXO21O94952 628 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 ABL1P00519 1130 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 LTFP02788 710 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 ASGR2P07307 311 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 CCDC172P0C7W6 258 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 GZMAP12544 262 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TFE3P19532 575 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TUBP50607 506 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SLC7A9P82251 487 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 CDK17Q00537 523 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SLC6A3Q01959 620 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 EIF4EBP2Q13542 120 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TDRD12Q587J7 1177 aaKnown RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TJAP1Q5JTD0 557 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 HECTD3Q5T447 861 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 OR6B2Q6IFH4 312 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 CNGA4Q8IV77 575 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 MCOLN2Q8IZK6 566 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SIX6OS1Q8N1H7 587 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 PDZD8Q8NEN9 1154 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SMARCD2Q92925 531 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SLC2A13Q96QE2 648 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 KXD1Q9BQD3 176 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 KLF16Q9BXK1 252 aaPredicted RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 ISCUQ9H1K1 167 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 PDCL3Q9H2J4 239 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TRPC7Q9HCX4 862 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TLR8Q9NR97 1041 aaKnown RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 GKN1Q9NS71 199 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 CALCOCO1Q9P1Z2 691 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 TMEM59LQ9UK28 342 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 NAALADL1Q9UQQ1 740 aa10.84□□□□□ -0.67
PTPN20-220ENST00000508715 BZW2Q9Y6E2 419 aaKnown RBP10.84□□□□□ -0.67
PTPN20-220ENST00000508715 SSU72P8A0A1W2PR75 194 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ABCB7O75027 752 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 HDCP19113 662 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 FLT3P36888 993 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 GSCP56915 257 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 GFPT1Q06210 699 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 GSE1Q14687 1217 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 MTF1Q14872 753 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ZNF77Q15935 545 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ARHGAP15Q53QZ3 475 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 RAB6CQ53S08 254 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 PPP1R15BQ5SWA1 713 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 MSANTD2Q6P1R3 559 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 VITQ6UXI7 678 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 SLC26A9Q7LBE3 791 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 TDRD5Q8NAT2 981 aaKnown RBP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 JOSD2Q8TAC2 188 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ASIC4Q96FT7 647 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 P2RY11Q96G91 374 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 GCNAQ96QF7 691 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 PANX2Q96RD6 677 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 RAB6CQ9H0N0 254 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 SLITRK6Q9H5Y7 841 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 KCNK12Q9HB15 430 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 SEPT11Q9NVA2 429 aaKnown RBP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ADAM22Q9P0K1 906 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 SFMBT1Q9UHJ3 866 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 FAM50BQ9Y247 325 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 CEP83Q9Y592 693 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 CPQQ9Y646 472 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 ZFP37Q9Y6Q3 630 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-220ENST00000508715 NUMBLQ9Y6R0 609 aa10.83□□□□□ -0.68
PTPN20-220ENST00000508715 TRAV19A0A0A6YYK7 116 aa10.82□□□□□ -0.68
PTPN20-220ENST00000508715 HEPACAM2A8MVW5 462 aa10.82□□□□□ -0.68
PTPN20-220ENST00000508715 GOLGA8SH3BPF8 625 aa10.82□□□□□ -0.68
PTPN20-220ENST00000508715 SCAMP3O14828 347 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms