RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ITGA5P08648 1049 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 QDPRP09417 244 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 CCDC175P0C221 793 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 KITP10721 976 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 ACADMP11310 421 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 IFNAR1P17181 557 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 GAP43P17677 238 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 CST5P28325 142 aaPredicted RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SLC7A1P30825 629 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SDHAP31040 664 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 PTGS2P35354 604 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 NNMTP40261 264 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 KIF11P52732 1056 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SLC16A1P53985 500 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 PNLIPRP1P54315 467 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SUMO3P55854 103 aaPredicted RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MRPS9P82933 396 aaKnown RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MC1RQ01726 317 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 COL10A1Q03692 680 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 DDR1Q08345 913 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SLC14A1Q13336 389 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 IL10RAQ13651 578 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 TOB2Q14106 344 aaPredicted RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 FGL2Q14314 439 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 ZNF174Q15697 407 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 ADIPOQQ15848 244 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 UGT8Q16880 541 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MUM1Q2TAK8 710 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 HSP90B2PQ58FF3 399 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MAP3K21Q5TCX8 1036 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MBNL2Q5VZF2 373 aaKnown RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 PPP1R42Q7Z4L9 355 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SLFN11Q7Z7L1 901 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MRGPREQ86SM8 312 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 LURAP1LQ8IV03 231 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 VRK3Q8IV63 474 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 RPAP2Q8IXW5 612 aaPredicted RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 IL17RDQ8NFM7 739 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 OR1N1Q8NGS0 311 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 BRSK1Q8TDC3 778 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 AFG1LQ8WV93 481 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 KRT35Q92764 455 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 PTP4A1Q93096 173 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 DACH2Q96NX9 599 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 TCF25Q9BQ70 676 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 HGH1Q9BTY7 390 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 POLR3CQ9BUI4 534 aaPredicted RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 RNPEPQ9H4A4 650 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 PRDM12Q9H4Q4 367 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 PDE7BQ9NP56 450 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 SAYSD1Q9NPB0 183 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 TBCCD1Q9NVR7 557 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 STK32BQ9NY57 414 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 MOSPD1Q9UJG1 213 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 ZNF215Q9UL58 517 aaPredicted RBP4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 B3GALT1Q9Y5Z6 326 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 CYP46A1Q9Y6A2 500 aa4.66□□□□□ -1.66
SMARCA5-202ENST00000508573 A0A0B4J203 849 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 ARHGAP10A1A4S6 786 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 H3BNC9 293 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 GTPBP1O00178 669 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 PIP5K1BO14986 540 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 KIAA0355O15063 1070 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 ZBTB43O43298 467 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 KLHL41O60662 606 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 MFAP3LO75121 409 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 STAM2O75886 525 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 USP1O94782 785 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SNX4O95219 450 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SCGB1D1O95968 90 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 FTLP02792 175 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 GZMAP12544 262 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 EEF2P13639 858 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 BRAFP15056 766 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 TFEBP19484 476 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 LMO1P25800 156 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 ABCD3P28288 659 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 TLX1P31314 330 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SLC5A3P53794 718 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 PRKAA2P54646 552 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SH3BGRP55822 239 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 NKX6-1P78426 367 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 IRF9Q00978 393 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CHAF1BQ13112 559 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 COG2Q14746 738 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 MYBPC3Q14896 1274 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 RAB30Q15771 203 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 DUSP28Q4G0W2 176 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CCDC157Q569K6 752 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 RABL3Q5HYI8 236 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 PITRM1Q5JRX3 1037 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CATSPEREQ5SY80 951 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 NFRKBQ6P4R8 1299 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 FIP1L1Q6UN15 594 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 BBS12Q6ZW61 710 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 PIWIL3Q7Z3Z3 882 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SZRD1Q7Z422 152 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CXorf67Q86X51 503 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 ELOA2Q8IYF1 753 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms