RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ABCB1P08183 1280 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 CYP11B2P19099 503 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PHKA2P46019 1235 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 MGAT5Q09328 741 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 NCOA4Q13772 614 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 AGKQ53H12 422 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 N4BP2L1Q5TBK1 243 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 MZT2BQ6NZ67 158 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SNX32Q86XE0 403 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 VPS37AQ8NEZ2 397 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PIWIL2Q8TC59 973 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 TFB1MQ8WVM0 346 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 HPS1Q92902 700 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PLEKHA8Q96JA3 519 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 THUMPD3Q9BV44 507 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 RMND5AQ9H871 391 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 S100A14Q9HCY8 104 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 RPRD1BQ9NQG5 326 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 PSMD13Q9UNM6 376 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 SLC12A4Q9UP95 1085 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ANKRD6Q9Y2G4 727 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 AP3M1Q9Y2T2 418 aa7.54□□□□□ -1.2
UBE2D3-224ENST00000508474 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 HUS1O60921 280 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 HLA-DRAP01903 254 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ACADVLP49748 655 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RAB25P57735 213 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 FOXD4Q12950 439 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 POLD3Q15054 466 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 GRTP1Q5TC63 336 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RBM12BQ8IXT5 1001 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 POU5F2Q8N7G0 328 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 POC5Q8NA72 575 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ETNPPLQ8TBG4 499 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 HES6Q96HZ4 224 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 POLR1BQ9H9Y6 1135 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SP110Q9HB58 689 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TMED5Q9Y3A6 229 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RAD54BQ9Y620 910 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 EFCAB6Q5THR3 1501 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CDC42BPAQ5VT25 1732 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SUPT3HB4E1H0 165 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 H0YIN7 160 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TRIM38O00635 465 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 MRASO14807 208 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 BAIAP3O94812 1187 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 YWHABP31946 246 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 PBX1P40424 430 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CRKLP46109 303 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RPL26P61254 145 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 MXD4Q14582 209 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 NTRK3Q16288 839 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CNPY1Q3B7I2 92 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 WDR59Q6PJI9 974 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 KLHL17Q6TDP4 642 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 MOXD1Q6UVY6 613 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TMEM26Q6ZUK4 368 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SYTL1Q8IYJ3 562 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 AGAP3Q96P47 875 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 INPP4AQ96PE3 977 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 MED15Q96RN5 788 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SPATA16Q9BXB7 569 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 WDR41Q9HAD4 459 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ARHGEF3Q9NR81 526 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RUVBL2Q9Y230 463 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 FNDC3AQ9Y2H6 1198 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RPS6KL1Q9Y6S9 549 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 METP08581 1390 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SPHKAPQ2M3C7 1700 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TCP10L2B9ZVM9 353 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 H0YC42 278 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 AGPSO00116 658 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 BIRC5O15392 142 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 DGAT1O75907 488 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TGM2P21980 687 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TRAP1Q12931 704 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 SMAD1Q15797 465 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CLEC16AQ2KHT3 1053 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CACHD1Q5VU97 1274 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 EGFLAMQ63HQ2 1017 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 KCNV1Q6PIU1 500 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RTL3Q8N8U3 475 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 KBTBD8Q8NFY9 601 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 RASSF5Q8WWW0 418 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 VCPIP1Q96JH7 1222 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 WRNIP1Q96S55 665 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 DNAJC18Q9H819 358 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 FAM217BQ9NTX9 383 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 TRNAU1APQ9NX07 287 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 GPC6Q9Y625 555 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 CAMSAP1Q5T5Y3 1602 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 NCANO14594 1321 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 ERBB3P21860 1342 aa7.53□□□□□ -1.2
UBE2D3-224ENST00000508474 NR5A2O00482 541 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms