RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 DDX1Q92499 740 aaKnown RBP15.73■□□□□ 0.11
RNF4-210ENST00000508235 MSANTD3Q96H12 275 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 PPP1R13BQ96KQ4 1090 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 LRRC3BQ96PB8 259 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 MFSD1Q9H3U5 465 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 SYNCQ9H7C4 482 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 ARHGEF3Q9NR81 526 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 GKN1Q9NS71 199 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 SMPD4Q9NXE4 827 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 TBC1D14Q9P2M4 693 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 NOCTQ9UK39 431 aaKnown RBP15.73■□□□□ 0.11
RNF4-210ENST00000508235 STRIP2Q9ULQ0 834 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 SH3BP1Q9Y3L3 701 aa15.73■□□□□ 0.11
RNF4-210ENST00000508235 E2F8A0AVK6 867 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 YJEFN3A6XGL0 299 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 PRR33A8MZF0 331 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 E5RJQ4 531 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 E7ENQ6 273 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 PIK3R2O00459 728 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 LTFP02788 710 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 IFNAR2P48551 515 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 COG7P83436 770 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 MLF2Q15773 248 aaPredicted RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 SLC44A4Q53GD3 710 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 BHLHA9Q7RTU4 235 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 ZDHHC17Q8IUH5 632 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 SCUBE3Q8IX30 993 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 SIX5Q8N196 739 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 WDTC1Q8N5D0 677 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 ZNF397Q8NF99 534 aaPredicted RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 OSCP1Q8WVF1 389 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 ATP2A3Q93084 1043 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 XPO4Q9C0E2 1151 aaKnown RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 NUCKS1Q9H1E3 243 aaKnown RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 DUS2Q9NX74 493 aaKnown RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 CFAP97Q9P2B7 532 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 CYTH4Q9UIA0 394 aa15.72■□□□□ 0.11
RNF4-210ENST00000508235 LSM7Q9UK45 103 aaKnown RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.72■□□□□ 0.11
RNF4-210ENST00000508235 SPTBN5Q9NRC6 3674 aaKnown RBP15.72■□□□□ 0.11
RNF4-210ENST00000508235 ITIH6Q6UXX5 1313 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 TTC28Q96AY4 2481 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 A0A1W2PQJ5 194 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 ARNTLO00327 626 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 GABBR2O75899 941 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 MMEP08473 750 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 PBX1P40424 430 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 AMPD2Q01433 879 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 ARID5AQ03989 594 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 ITPRIPL2Q3MIP1 535 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 EFHC1Q5JVL4 640 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 SFMBT2Q5VUG0 894 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 BEND5Q7L4P6 421 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 CPA6Q8N4T0 437 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 BAP1Q92560 729 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 NDRG1Q92597 394 aaKnown RBP15.71■□□□□ 0.11
RNF4-210ENST00000508235 PBXIP1Q96AQ6 731 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 FAM149B1Q96BN6 582 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 OTUB2Q96DC9 234 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 CPXM1Q96SM3 734 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 FAM83CQ9BQN1 747 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 C8orf33Q9H7E9 229 aaPredicted RBP15.71■□□□□ 0.11
RNF4-210ENST00000508235 MARCH2Q9P0N8 246 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 RASAL2Q9UJF2 1139 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 CA14Q9ULX7 337 aa15.71■□□□□ 0.11
RNF4-210ENST00000508235 COL4A2P08572 1712 aa15.71■□□□□ 0.1
RNF4-210ENST00000508235 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 MAN2B1O00754 1011 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 PAPSS1O43252 624 aaPredicted RBP15.7■□□□□ 0.1
RNF4-210ENST00000508235 TBX18O95935 607 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 GLI1P08151 1106 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 KPNA1P52294 538 aaPredicted RBP15.7■□□□□ 0.1
RNF4-210ENST00000508235 STARD6P59095 220 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 ZXDBP98169 803 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 EFEMP1Q12805 493 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 NR1H3Q13133 447 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 RUNX3Q13761 415 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 TRIM14Q14142 442 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 ASIC2Q16515 512 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 TOGARAM2Q6ZUX3 1019 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 ERICH1Q86X53 443 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 MIB1Q86YT6 1006 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 CLEC4CQ8WTT0 213 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 EXOC4Q96A65 974 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 ZFYVE19Q96K21 471 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 ZFRQ96KR1 1074 aaKnown RBP15.7■□□□□ 0.1
RNF4-210ENST00000508235 TTYH3Q9C0H2 523 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 HEBP1Q9NRV9 189 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 ASNSD1Q9NWL6 643 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 AIPL1Q9NZN9 384 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 NUDT5Q9UKK9 219 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 MRPS17Q9Y2R5 130 aaKnown RBP15.7■□□□□ 0.1
RNF4-210ENST00000508235 TECTAO75443 2155 aa15.7■□□□□ 0.1
RNF4-210ENST00000508235 KRBA1A5PL33 1030 aa15.69■□□□□ 0.1
RNF4-210ENST00000508235 STK25O00506 426 aa15.69■□□□□ 0.1
RNF4-210ENST00000508235 CAPN9O14815 690 aa15.69■□□□□ 0.1
RNF4-210ENST00000508235 NFATC1O95644 943 aa15.69■□□□□ 0.1
RNF4-210ENST00000508235 NCAM1P13591 858 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms