RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SMYD4Q8IYR2 804 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-206ENST00000507875 MYOCDQ8IZQ8 938 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GSDMBQ8TAX9 411 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 P2RX5Q93086 422 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 C18orf8Q96DM3 657 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 FAM81BQ96LP2 452 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 PARVGQ9HBI0 331 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 CATSPERZQ9NTU4 200 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 DONSONQ9NYP3 566 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
CLCN3-206ENST00000507875 FAM227AF5H4B4 570 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 KIF2AO00139 706 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 DDX39AO00148 427 aaKnown RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 CTIFO43310 598 aaKnown RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 STBD1O95210 358 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 WISP1O95388 367 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 SNAI1O95863 264 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 LPLP06858 475 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 EEF1GP26641 437 aaKnown RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 PRCPP42785 496 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 GRK6P43250 576 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 MAPK10P53779 464 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 STX17P56962 302 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 PSMC6P62333 389 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 NKX3-2P78367 333 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 SP2Q02086 613 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ACVR2BQ13705 512 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 PCSK7Q16549 785 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ZNF484Q5JVG2 852 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 RNF220Q5VTB9 566 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 KLHDC7AQ5VTJ3 777 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 IRGCQ6NXR0 463 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 DENND1CQ8IV53 801 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 PPTC7Q8NI37 304 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 TCP11Q8WWU5 503 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 NELFBQ8WX92 580 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ZNF333Q96JL9 665 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 GPR20Q99678 358 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 REEP2Q9BRK0 252 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ARHGAP39Q9C0H5 1083 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 GPR27Q9NS67 375 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 FBXO10Q9UK96 956 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 DOCK3Q8IZD9 2030 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 KAT6AQ92794 2004 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 PDXKO00764 312 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 CNTFP26441 200 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 STAT5BP51692 787 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ENPEPQ07075 957 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ARHGAP1Q07960 439 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 NSUN2Q08J23 767 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 XKR9Q5GH70 373 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 HERC4Q5GLZ8 1057 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 CDKAL1Q5VV42 579 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 FAM47EQ6ZV65 393 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 USP45Q70EL2 814 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 APTXQ7Z2E3 356 aaKnown RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 HEATR4Q86WZ0 1026 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ZC3H3Q8IXZ2 948 aaKnown RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 C17orf50Q8WW18 174 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 IQCDQ96DY2 449 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 FCRL3Q96P31 734 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-206ENST00000507875 MIPEPQ99797 713 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 FAM167BQ9BTA0 163 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 ZDHHC5Q9C0B5 715 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 CDIP1Q9H305 208 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 TMEM206Q9H813 350 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 FAM105AQ9NUU6 356 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 CRYL1Q9Y2S2 319 aa7.55□□□□□ -1.2
CLCN3-206ENST00000507875 C2orf71A6NGG8 1288 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CCP110O43303 1012 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CALUO43852 315 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 HBP1O60381 514 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 B3GALNT1O75752 331 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TUBB4AP04350 444 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 AMY2AP04746 511 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 BMP4P12644 408 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 AMY2BP19961 511 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 IRF9Q00978 393 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ROR1Q01973 937 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 PRKCEQ02156 737 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 PGS1Q32NB8 556 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 FILIP1LQ4L180 1135 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 FAM133BQ5BKY9 247 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 MFSD14CQ5VZR4 134 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 MTERF4Q7Z6M4 381 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TRIM74Q86UV6 250 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 TRIM73Q86UV7 250 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 UBXN10Q96LJ8 280 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 CCDC140Q96MF4 163 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 MAP7D2Q96T17 732 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 NTPCRQ9BSD7 190 aaKnown RBP7.54□□□□□ -1.2
CLCN3-206ENST00000507875 ATP6V0A4Q9HBG4 840 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 IRAK4Q9NWZ3 460 aa7.54□□□□□ -1.2
CLCN3-206ENST00000507875 LIMA1Q9UHB6 759 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms