RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 ATP2A2P16615 1042 aaKnown RBP22.9■■□□□ 1.26
SPCS3-203ENST00000507678 NCALDP61601 193 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 ELF3P78545 371 aaPredicted RBP22.9■■□□□ 1.26
SPCS3-203ENST00000507678 PKDCCQ504Y2 493 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 NT5DC4Q86YG4 428 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 TCP10LQ8TDR4 215 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 GTF3C2Q8WUA4 911 aaPredicted RBP22.9■■□□□ 1.26
SPCS3-203ENST00000507678 SLC4A5Q9BY07 1137 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 SENP1Q9P0U3 644 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 CACNG4Q9UBN1 327 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 PRKAG3Q9UGI9 489 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 CPA4Q9UI42 421 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 GBE1Q04446 702 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 GRB14Q14449 540 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 PLEKHH3Q7Z736 793 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 AGGF1Q8N302 714 aaeCLIP22.9■■□□□ 1.26
SPCS3-203ENST00000507678 DCAKDQ8WVC6 231 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 STK38LQ9Y2H1 464 aa22.9■■□□□ 1.26
SPCS3-203ENST00000507678 E7ESA3 106 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 CYP2F1P24903 491 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 GNL1P36915 607 aaPredicted RBP22.89■■□□□ 1.26
SPCS3-203ENST00000507678 PTK7Q13308 1070 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 KCNJ11Q14654 390 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 STILQ15468 1287 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 SNCBQ16143 134 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 FBXO47Q5MNV8 452 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 ADGRD1Q6QNK2 874 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 TMEM110Q86TL2 294 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 PRPF39Q86UA1 669 aaKnown RBP22.89■■□□□ 1.26
SPCS3-203ENST00000507678 CEP57Q86XR8 500 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 TTC39CQ8N584 583 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 SLC2A14Q8TDB8 520 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 FAM149B1Q96BN6 582 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 MFHAS1Q9Y4C4 1052 aa22.89■■□□□ 1.26
SPCS3-203ENST00000507678 STAU1O95793 577 aaKnown RBP22.89■■□□□ 1.25
SPCS3-203ENST00000507678 A6NJR5 290 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 IGF2BP3O00425 579 aaKnown RBP eCLIP22.88■■□□□ 1.25
SPCS3-203ENST00000507678 TREHO43280 583 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 GSTA1P08263 222 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PAX7P23759 505 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 BEX3Q00994 111 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 OVGP1Q12889 678 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PDK2Q15119 407 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PDK4Q16654 411 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PYROXD2Q8N2H3 581 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 KLHL29Q96CT2 875 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 CYTH2Q99418 400 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PTPN18Q99952 460 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 SNX25Q9H3E2 840 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PLEKHA5Q9HAU0 1116 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 RXFP1Q9HBX9 757 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 ZSWIM8A7E2V4 1837 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 MT-ND3P03897 115 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 INHBAP08476 426 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 DARSP14868 501 aaKnown RBP22.88■■□□□ 1.25
SPCS3-203ENST00000507678 DESP17661 470 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 FAAP100Q0VG06 881 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 ZNF467Q7Z7K2 595 aaPredicted RBP22.88■■□□□ 1.25
SPCS3-203ENST00000507678 CCDC185Q8N715 623 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 PPM1NQ8N819 430 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 TBC1D31Q96DN5 1066 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 ETNK1Q9HBU6 452 aa22.88■■□□□ 1.25
SPCS3-203ENST00000507678 SMIM28A0A1B0GU29 152 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 KPNA7A9QM74 516 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 ACAT1P24752 427 aaKnown RBP22.87■■□□□ 1.25
SPCS3-203ENST00000507678 RABGGTBP53611 331 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 SMAD1Q15797 465 aaKnown RBP22.87■■□□□ 1.25
SPCS3-203ENST00000507678 ZBTB6Q15916 424 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 FAM131BQ86XD5 332 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 FBXO41Q8TF61 875 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 KBTBD7Q8WVZ9 684 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 UPF1Q92900 1129 aaKnown RBP eCLIP22.87■■□□□ 1.25
SPCS3-203ENST00000507678 SLC24A3Q9HC58 644 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 TMPRSS4Q9NRS4 437 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 PAK5Q9P286 719 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 MAD1L1Q9Y6D9 718 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 BRCA2P51587 3418 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 GLTPD2A6NH11 291 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 RRN3P2A6NIE6 340 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 NEBLO76041 1014 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 NEFHP12036 1026 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 SOX4Q06945 474 aaPredicted RBP22.87■■□□□ 1.25
SPCS3-203ENST00000507678 E2F5Q15329 346 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 IQSEC1Q6DN90 963 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 ZNF75CPQ92670 426 aaPredicted RBP22.87■■□□□ 1.25
SPCS3-203ENST00000507678 ERP27Q96DN0 273 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 NRDE2Q9H7Z3 1164 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 MORF4L1Q9UBU8 362 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 AP4E1Q9UPM8 1137 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 TEX264Q9Y6I9 313 aa22.87■■□□□ 1.25
SPCS3-203ENST00000507678 CLDN5O00501 218 aa22.86■■□□□ 1.25
SPCS3-203ENST00000507678 IGFBP6P24592 240 aaPredicted RBP22.86■■□□□ 1.25
SPCS3-203ENST00000507678 YWHAZP63104 245 aaKnown RBP22.86■■□□□ 1.25
SPCS3-203ENST00000507678 SLC10A2Q12908 348 aaPredicted RBP22.86■■□□□ 1.25
SPCS3-203ENST00000507678 PREPLQ4J6C6 727 aaPredicted RBP22.86■■□□□ 1.25
SPCS3-203ENST00000507678 APBB1IPQ7Z5R6 666 aaPredicted RBP22.86■■□□□ 1.25
SPCS3-203ENST00000507678 FAM228AQ86W67 206 aa22.86■■□□□ 1.25
SPCS3-203ENST00000507678 ANKLE1Q8NAG6 615 aa22.86■■□□□ 1.25
SPCS3-203ENST00000507678 SERAC1Q96JX3 654 aa22.86■■□□□ 1.25
SPCS3-203ENST00000507678 NPHS2Q9NP85 383 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms