RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 YJEFN3A6XGL0 299 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 E7ENQ6 273 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 H2AFZP0C0S5 128 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 KRT3P12035 628 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 NCAM1P13591 858 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 CEBPBP17676 345 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 KRT83P78385 493 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 GFPT1Q06210 699 aaPredicted RBP21.02■□□□□ 0.96
USP53-203ENST00000507597 CCDC173Q0VFZ6 552 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 ASTE1Q2TB18 679 aaPredicted RBP21.02■□□□□ 0.96
USP53-203ENST00000507597 C10orf120Q5SQS8 335 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 TXNDC8Q6A555 127 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 DNAJC24Q6P3W2 148 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 H2AFVQ71UI9 128 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 TMEM150AQ86TG1 271 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 NPAS3Q8IXF0 933 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 CMTM8Q8IZV2 173 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 C3orf20Q8ND61 904 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 CTNNBL1Q8WYA6 563 aaPredicted RBP21.02■□□□□ 0.96
USP53-203ENST00000507597 ING5Q8WYH8 240 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 NXPE3Q969Y0 559 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.02■□□□□ 0.96
USP53-203ENST00000507597 STAP1Q9ULZ2 295 aa21.02■□□□□ 0.96
USP53-203ENST00000507597 EPN1Q9Y6I3 576 aaPredicted RBP21.02■□□□□ 0.96
USP53-203ENST00000507597 GOLGA8SH3BPF8 625 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 MOSPD3O75425 235 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 TADA3O75528 432 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 LAMP2P13473 410 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 GJA1P17302 382 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 GBP1P32455 592 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 NOS2P35228 1153 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 GPC5P78333 572 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 COG7P83436 770 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 TFF2Q03403 129 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 DCUN1D2Q6PH85 259 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 OLFML1Q6UWY5 402 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 SCD5Q86SK9 330 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 ZNF653Q96CK0 615 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.01■□□□□ 0.95
USP53-203ENST00000507597 EPS15L1Q9UBC2 864 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 LCMT1Q9UIC8 334 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 INTUQ9ULD6 942 aa21.01■□□□□ 0.95
USP53-203ENST00000507597 PATJQ8NI35 1801 aa21■□□□□ 0.95
USP53-203ENST00000507597 SIGLEC16A6NMB1 481 aa21■□□□□ 0.95
USP53-203ENST00000507597 EIF3CLB5ME19 914 aaKnown RBP21■□□□□ 0.95
USP53-203ENST00000507597 GABBR2O75899 941 aa21■□□□□ 0.95
USP53-203ENST00000507597 OAS1P00973 400 aaKnown RBP21■□□□□ 0.95
USP53-203ENST00000507597 MBL2P11226 248 aaPredicted RBP21■□□□□ 0.95
USP53-203ENST00000507597 SLC7A9P82251 487 aa21■□□□□ 0.95
USP53-203ENST00000507597 LRRC8AQ8IWT6 810 aa21■□□□□ 0.95
USP53-203ENST00000507597 ZSCAN18Q8TBC5 510 aaPredicted RBP21■□□□□ 0.95
USP53-203ENST00000507597 SMARCD2Q92925 531 aa21■□□□□ 0.95
USP53-203ENST00000507597 EIF3CQ99613 913 aaKnown RBP21■□□□□ 0.95
USP53-203ENST00000507597 SLC46A2Q9BY10 475 aa21■□□□□ 0.95
USP53-203ENST00000507597 NMUR1Q9HB89 426 aa21■□□□□ 0.95
USP53-203ENST00000507597 ZFP14Q9HCL3 533 aa21■□□□□ 0.95
USP53-203ENST00000507597 PRDM6Q9NQX0 595 aa21■□□□□ 0.95
USP53-203ENST00000507597 OBP2AQ9NY56 170 aa21■□□□□ 0.95
USP53-203ENST00000507597 TAS2R14Q9NYV8 317 aa21■□□□□ 0.95
USP53-203ENST00000507597 CNOT8Q9UFF9 292 aaKnown RBP21■□□□□ 0.95
USP53-203ENST00000507597 ARHGAP6O43182 974 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 DAB1O75553 588 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 NDUFA10O95299 355 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 MAGEA1P43355 309 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 RNASE9P60153 205 aaKnown RBP20.99■□□□□ 0.95
USP53-203ENST00000507597 PTP4A2Q12974 167 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 MTA1Q13330 715 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 DCAF6Q58WW2 860 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 ZDHHC14Q8IZN3 488 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 CELF5Q8N6W0 485 aaKnown RBP20.99■□□□□ 0.95
USP53-203ENST00000507597 KIAA1958Q8N8K9 716 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 ARL14EPQ8N8R7 260 aaPredicted RBP20.99■□□□□ 0.95
USP53-203ENST00000507597 CLEC4CQ8WTT0 213 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 NDRG1Q92597 394 aaKnown RBP20.99■□□□□ 0.95
USP53-203ENST00000507597 PDLIM2Q96JY6 352 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 RPGRIP1Q96KN7 1286 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 SERPINB11Q96P15 392 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 ASB2Q96Q27 587 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 NCAPGQ9BPX3 1015 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 TRPV4Q9HBA0 871 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 TDP1Q9NUW8 608 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 TJP2Q9UDY2 1190 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 CDH22Q9UJ99 828 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 PAXBP1Q9Y5B6 917 aa20.99■□□□□ 0.95
USP53-203ENST00000507597 GREB1Q4ZG55 1949 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 C2orf78A6NCI8 922 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 COCHO43405 550 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 OLFM2O95897 454 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 F9P00740 461 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 ABCB4P21439 1286 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 RRM1P23921 792 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 MATKP42679 507 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 MSANTD2Q6P1R3 559 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 SND1Q7KZF4 910 aaKnown RBP eCLIP20.98■□□□□ 0.95
USP53-203ENST00000507597 BHLHA9Q7RTU4 235 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 ARID3BQ8IVW6 561 aaPredicted RBP20.98■□□□□ 0.95
USP53-203ENST00000507597 ADHFE1Q8IWW8 467 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 DEFB106AQ8N104 65 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 EDEM1Q92611 657 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 CALR3Q96L12 384 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms