RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ITGA2BP08514 1039 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 FAM90A15PP0C7V4 464 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 FAM90A14PP0C7W9 464 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 TNFRSF1AP19438 455 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 TGM1P22735 817 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 CTGFP29279 349 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 ADRA1BP35368 520 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 MPLP40238 635 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 ALDH18A1P54886 795 aaKnown RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 FOXI1Q12951 378 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 BTBD16Q32M84 506 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 TRIM60Q495X7 471 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 MSANTD2Q6P1R3 559 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 PIK3AP1Q6ZUJ8 805 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 USP51Q70EK9 711 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 SLC44A2Q8IWA5 706 aaPredicted RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 GALNT15Q8N3T1 639 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 FSTL5Q8N475 847 aaPredicted RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 RILPL2Q969X0 211 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 RSPRY1Q96DX4 576 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 LTV1Q96GA3 475 aaPredicted RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 NUDT22Q9BRQ3 303 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 RTKNQ9BST9 563 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 DDX23Q9BUQ8 820 aaKnown RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 ALG8Q9BVK2 526 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 TRIM36Q9NQ86 728 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 HERC5Q9UII4 1024 aaKnown RBP4.02□□□□□ -1.77
LSM6-205ENST00000507449 ASAP1Q9ULH1 1129 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 SH2B3Q9UQQ2 575 aa4.02□□□□□ -1.77
LSM6-205ENST00000507449 PNMA6EA0A0J9YXQ4 647 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 B9A039 149 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 M0QZQ0 153 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PMPCBO75439 489 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 RPP40O75818 363 aaKnown RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 FAM155BO75949 473 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 ACTL6BO94805 426 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 ZNF202O95125 648 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 NR2F6P10588 404 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 ZFXP17010 805 aaPredicted RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 KRT4P19013 534 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PAX3P23760 479 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 GKP32189 559 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PPM1FP49593 454 aaPredicted RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 MTHFSP49914 203 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 SEC24CP53992 1094 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PRKAA2P54646 552 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 EIF4A1P60842 406 aaKnown RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 E2F1Q01094 437 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 DEUP1Q05D60 604 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PPFIA1Q13136 1202 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 BMPR2Q13873 1038 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PTPAQ15257 358 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 AASDHQ4L235 1098 aaPredicted RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 TMEM196Q5HYL7 178 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 TEDDM1Q5T9Z0 273 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 FAM90A2PQ658T7 463 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 ZNF627Q7L945 461 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 PEG10Q86TG7 708 aaKnown RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 MOGAT3Q86VF5 341 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 BEND2Q8NDZ0 799 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 XAGE5Q8WWM1 108 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 LARP4BQ92615 738 aaKnown RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 GCC1Q96CN9 775 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 ALG13Q9NP73 1137 aaKnown RBP4.01□□□□□ -1.77
LSM6-205ENST00000507449 FOXJ2Q9P0K8 574 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 STEAP1Q9UHE8 339 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 DAPP1Q9UN19 280 aa4.01□□□□□ -1.77
LSM6-205ENST00000507449 GXYLT2A0PJZ3 443 aa4□□□□□ -1.77
LSM6-205ENST00000507449 LINC00473A8K010 186 aa4□□□□□ -1.77
LSM6-205ENST00000507449 CTIFO43310 598 aaKnown RBP4□□□□□ -1.77
LSM6-205ENST00000507449 TJP3O95049 919 aa4□□□□□ -1.77
LSM6-205ENST00000507449 ESRRBO95718 433 aa4□□□□□ -1.77
LSM6-205ENST00000507449 HKR1P10072 659 aa4□□□□□ -1.77
LSM6-205ENST00000507449 CST5P28325 142 aaPredicted RBP4□□□□□ -1.77
LSM6-205ENST00000507449 AKT1P31749 480 aa4□□□□□ -1.77
LSM6-205ENST00000507449 ARL4CP56559 192 aa4□□□□□ -1.77
LSM6-205ENST00000507449 AP2B1P63010 937 aa4□□□□□ -1.77
LSM6-205ENST00000507449 BLOC1S1P78537 153 aa4□□□□□ -1.77
LSM6-205ENST00000507449 PSG6Q00889 435 aa4□□□□□ -1.77
LSM6-205ENST00000507449 BIRC3Q13489 604 aa4□□□□□ -1.77
LSM6-205ENST00000507449 KCNJ12Q14500 433 aa4□□□□□ -1.77
LSM6-205ENST00000507449 NBPF8Q3BBV2 869 aa4□□□□□ -1.77
LSM6-205ENST00000507449 KAZNQ674X7 775 aa4□□□□□ -1.77
LSM6-205ENST00000507449 RINT1Q6NUQ1 792 aa4□□□□□ -1.77
LSM6-205ENST00000507449 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
LSM6-205ENST00000507449 KLHL17Q6TDP4 642 aa4□□□□□ -1.77
LSM6-205ENST00000507449 Q6ZWC4 215 aa4□□□□□ -1.77
LSM6-205ENST00000507449 ZNF354CQ86Y25 554 aa4□□□□□ -1.77
LSM6-205ENST00000507449 SMAP1Q8IYB5 467 aaPredicted RBP4□□□□□ -1.77
LSM6-205ENST00000507449 Q8N1X5 172 aa4□□□□□ -1.77
LSM6-205ENST00000507449 CLASRPQ8N2M8 674 aaKnown RBP4□□□□□ -1.77
LSM6-205ENST00000507449 LCORLQ8N3X6 602 aa4□□□□□ -1.77
LSM6-205ENST00000507449 RSC1A1Q92681 617 aa4□□□□□ -1.77
LSM6-205ENST00000507449 PRR11Q96HE9 360 aaPredicted RBP4□□□□□ -1.77
LSM6-205ENST00000507449 COQ10AQ96MF6 247 aa4□□□□□ -1.77
LSM6-205ENST00000507449 LENG8Q96PV6 779 aaPredicted RBP4□□□□□ -1.77
LSM6-205ENST00000507449 PAGR1Q9BTK6 254 aa4□□□□□ -1.77
LSM6-205ENST00000507449 ZNF341Q9BYN7 854 aa4□□□□□ -1.77
LSM6-205ENST00000507449 ZCWPW1Q9H0M4 648 aa4□□□□□ -1.77
LSM6-205ENST00000507449 VPS16Q9H269 839 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms