RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 COG7P83436 770 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 AASDHQ4L235 1098 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 ARHGAP17Q68EM7 881 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 NAIF1Q69YI7 327 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 IL31Q6EBC2 164 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 FOXR2Q6PJQ5 311 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 KBTBD6Q86V97 674 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 ETFBKMTQ8IXQ9 262 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 ZC3H3Q8IXZ2 948 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 SPATA20Q8TB22 786 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 WHAMMQ8TF30 809 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 TMEM176AQ96HP8 235 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 CHAMP1Q96JM3 812 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 SPACA7Q96KW9 195 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 HEXIM2Q96MH2 286 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 ARRDC1-AS1Q9H2J1 176 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 GDPD2Q9HCC8 539 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 CISHQ9NSE2 258 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 COQ4Q9Y3A0 265 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 USP3Q9Y6I4 520 aa15.2■□□□□ 0.02
HMGCS1-203ENST00000507004 HHLA1C9JL84 531 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 RARGP13631 454 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 TBXAS1P24557 533 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 MPLP40238 635 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 PRCPP42785 496 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 SEC13P55735 322 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 CETN1Q12798 172 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 ORC1Q13415 861 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 PNOCQ13519 176 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 ANO4Q32M45 955 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 SPDYCQ5MJ68 293 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 PLA2G2CQ5R387 149 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 TCERG1LQ5VWI1 586 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 SDE2Q6IQ49 451 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 BBS7Q8IWZ6 715 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 TERB1Q8NA31 727 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 DHTKD1Q96HY7 919 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 DUSP15Q9H1R2 295 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 ARMCX3Q9UH62 379 aaPredicted RBP15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 KIAA1257Q9ULG3 409 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 STARD13Q9Y3M8 1113 aa15.19■□□□□ 0.02
HMGCS1-203ENST00000507004 PMM2O15305 246 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 CACNG3O60359 315 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 TULP3O75386 442 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 GBP1P32455 592 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 CHKAP35790 457 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 KIR2DL1P43626 348 aaPredicted RBP15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 SLC6A11P48066 632 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 DCAF17Q5H9S7 520 aaPredicted RBP15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 C10orf120Q5SQS8 335 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 PPP1R26Q5T8A7 1209 aaPredicted RBP15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 GRAMD4Q6IC98 578 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 ANO7Q6IWH7 933 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 IL17RCQ8NAC3 791 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 ANKRD52Q8NB46 1076 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 TXNDC5Q8NBS9 432 aaKnown RBP15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 ENGASEQ8NFI3 743 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 ELMO3Q96BJ8 720 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 NAGPAQ9UK23 515 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 STRIP2Q9ULQ0 834 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 SDK1Q7Z5N4 2213 aa15.18■□□□□ 0.02
HMGCS1-203ENST00000507004 KIAA1549LQ6ZVL6 1849 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 CYP26A1O43174 497 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 KLF8O95600 359 aaPredicted RBP15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 IRF1P10914 325 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 TIE1P35590 1138 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 ZNF394Q53GI3 561 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 PMS2CLQ68D20 193 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 C12orf40Q86WS4 652 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 SMYD4Q8IYR2 804 aaPredicted RBP15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 PHTF2Q8N3S3 785 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 CCDC33Q8N5R6 958 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 ALLCQ8N6M5 410 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 ZNF513Q8N8E2 541 aaPredicted RBP15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 BBS2Q9BXC9 721 aa15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 OLA1Q9NTK5 396 aaKnown RBP15.17■□□□□ 0.02
HMGCS1-203ENST00000507004 MYO16Q9Y6X6 1858 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 A0A1W2PQH9 124 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 BICDL2A1A5D9 508 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 BCLAF3A2AJT9 711 aaKnown RBP15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 GFRA2O00451 464 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 NPC1O15118 1278 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 P4HA2O15460 535 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 CAVIN2O95810 425 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 ZNF132P52740 706 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 BCAT1P54687 386 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 RAD23BP54727 409 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 ZNF445P59923 1031 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 CREB5Q02930 508 aa15.16■□□□□ 0.02
HMGCS1-203ENST00000507004 KDSRQ06136 332 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms