RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PASD1Q8IV76 773 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 SUGP1Q8IWZ8 645 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 ZNF276Q8N554 614 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 NEK11Q8NG66 645 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 DDX1Q92499 740 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 CHFRQ96EP1 664 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 PCMTD1Q96MG8 357 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 KLF16Q9BXK1 252 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 SLC4A5Q9BY07 1137 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 LINC00597Q9H2U6 94 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 DUS2Q9NX74 493 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 TJP2Q9UDY2 1190 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 F5P12259 2224 aa19.15■□□□□ 0.66
PDLIM7-216ENST00000506537 KANSL1LA0AUZ9 987 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 GREM1O60565 184 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 CYP11B1P15538 503 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 AOC1P19801 751 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 ATP5C1P36542 298 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 PDCLQ13371 301 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 RUNX3Q13761 415 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 PDGFRLQ15198 375 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 C10orf120Q5SQS8 335 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 TXNDC11Q6PKC3 985 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 NOP9Q86U38 636 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 DDX42Q86XP3 938 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 ARHGAP18Q8N392 663 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 EPS8L1Q8TE68 723 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 STK32AQ8WU08 396 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 SHDQ96IW2 340 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 NACA2Q9H009 215 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 LTB4R2Q9NPC1 389 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 ST7Q9NRC1 585 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 MTF2Q9Y483 593 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 DAAM1Q9Y4D1 1078 aa19.14■□□□□ 0.65
PDLIM7-216ENST00000506537 E5RJQ4 531 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 SPECC1L-ADORA2AF8WAN1 911 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 GFPT2O94808 682 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 IRF1P10914 325 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 RALAP11233 206 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 TARSP26639 723 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 AVPR2P30518 371 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 CTHP32929 405 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 SOX5P35711 763 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 IFNAR2P48551 515 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 CLCN5P51795 746 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 BPIFB4P59827 614 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 ITPRIPL2Q3MIP1 535 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 LRSAM1Q6UWE0 723 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 CCDC105Q8IYK2 499 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 ZNF687Q8N1G0 1237 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 C1orf131Q8NDD1 294 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 PJA1Q8NG27 643 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 IRGQQ8WZA9 623 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 MIS12Q9H081 205 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 LHX5Q9H2C1 402 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 DNMT3LQ9UJW3 386 aa19.13■□□□□ 0.65
PDLIM7-216ENST00000506537 MIA3Q5JRA6 1907 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 STK25O00506 426 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 PAPSS1O43252 624 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 FBXO21O94952 628 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 GLULP15104 373 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 KPNA1P52294 538 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 MLLT6P55198 1093 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 FANCCQ00597 558 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 EFEMP1Q12805 493 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 TAF3Q5VWG9 929 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 BSPRYQ5W0U4 402 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 BTBD8Q5XKL5 378 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 ZNF852Q6ZMS4 543 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 TMEM110Q86TL2 294 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 MIB1Q86YT6 1006 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 SCUBE3Q8IX30 993 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 KIAA1958Q8N8K9 716 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 SLC20A1Q8WUM9 679 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 EDEM1Q92611 657 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 ATP2A3Q93084 1043 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 SPAG5Q96R06 1193 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 CPXM1Q96SM3 734 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 CDK5RAP1Q96SZ6 601 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 TSPY26PQ9H489 355 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 C8orf33Q9H7E9 229 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 ECT2Q9H8V3 914 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 RASAL2Q9UJF2 1139 aa19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 NOCTQ9UK39 431 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-216ENST00000506537 E2F8A0AVK6 867 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 SERPINC1P01008 464 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 KRT9P35527 623 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 ACADSBP45954 432 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 TPM4P67936 248 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 NR1I3Q14994 352 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 UBXN2BQ14CS0 331 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 FILIP1LQ4L180 1135 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 NAIF1Q69YI7 327 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 TADA2BQ86TJ2 420 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 BBS7Q8IWZ6 715 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 PIWIL1Q96J94 861 aaKnown RBP19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 DLGAP2Q9P1A6 1054 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 SH3BP1Q9Y3L3 701 aa19.11■□□□□ 0.65
PDLIM7-216ENST00000506537 A0A1W2PQC6 194 aa19.1■□□□□ 0.65
PDLIM7-216ENST00000506537 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms