RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MMP8P22894 467 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 CLDN10P78369 228 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 SLC25A3Q00325 362 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 LPIN1Q14693 890 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 LRRC36Q1X8D7 754 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 BRDTQ58F21 947 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 MDH1BQ5I0G3 518 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 STRIP1Q5VSL9 837 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 TMEM179Q6ZVK1 233 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 ZNF513Q8N8E2 541 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 PLGRKTQ9HBL7 147 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 DDX4Q9NQI0 724 aaKnown RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 SCN4AP35499 1836 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 A0A0B4J269 797 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 GARTP22102 1010 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 TBXAS1P24557 533 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 PRKCHP24723 683 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 ELK3P41970 407 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 CD151P48509 253 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 TUBB3Q13509 450 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 TAZQ16635 292 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 MYLK3Q32MK0 819 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 FSCBQ5H9T9 825 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 METTL25Q8N6Q8 603 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 DLG3Q92796 817 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 ABTB1Q969K4 478 aaPredicted RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 LRRC39Q96DD0 335 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 VPS50Q96JG6 964 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 ZNF518BQ9C0D4 1074 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 RSL24D1Q9UHA3 163 aaKnown RBP16.47■□□□□ 0.23
SCLT1-208ENST00000506368 ARHGAP26Q9UNA1 814 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 IVNS1ABPQ9Y6Y0 642 aa16.47■□□□□ 0.23
SCLT1-208ENST00000506368 SH3PXD2BA1X283 911 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 GOLGA8IPA6NC78 632 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 GOLGA8JA6NMD2 632 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 KBTBD13C9JR72 458 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 TMEM63AO94886 807 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 CAPNS1P04632 268 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 CCDC130P13994 396 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 ALOX15P16050 662 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-208ENST00000506368 PORP16435 677 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-208ENST00000506368 GNA15P30679 374 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 GMPSP49915 693 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-208ENST00000506368 NUP107P57740 925 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 OTUD4Q01804 1114 aaKnown RBP16.46■□□□□ 0.23
SCLT1-208ENST00000506368 UBAP2LQ14157 1087 aaKnown RBP16.46■□□□□ 0.23
SCLT1-208ENST00000506368 RSBN1LQ6PCB5 846 aaPredicted RBP16.46■□□□□ 0.23
SCLT1-208ENST00000506368 PACS1Q6VY07 963 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 TIFABQ6ZNK6 161 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 NIPA1Q7RTP0 329 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 ACTL9Q8TC94 416 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 LRGUKQ96M69 825 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 GCNAQ96QF7 691 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 SMYD3Q9H7B4 428 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 PCDHAC2Q9Y5I4 1007 aa16.46■□□□□ 0.23
SCLT1-208ENST00000506368 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 STK10O94804 968 aaKnown RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 SRGAP2CP0DJJ0 459 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 SRGAP2BP0DMP2 458 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 CDH2P19022 906 aaPredicted RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 CDK9P50750 372 aaKnown RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 SCNN1DP51172 638 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 EPHB1P54762 984 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 PSMC5P62195 406 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 MRPS5P82675 430 aaKnown RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 Q6ZNX1 250 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 CDHR3Q6ZTQ4 885 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 ACMSDQ8TDX5 336 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 DNAJC1Q96KC8 554 aaKnown RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 MRPL1Q9BYD6 325 aaKnown RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 INO80BQ9C086 356 aaPredicted RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 GRIP2Q9C0E4 1043 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 DDX18Q9NVP1 670 aaKnown RBP16.46■□□□□ 0.22
SCLT1-208ENST00000506368 STK39Q9UEW8 545 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 AP4B1Q9Y6B7 739 aa16.46■□□□□ 0.22
SCLT1-208ENST00000506368 RFPL1O75677 317 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 PROCP04070 461 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 GRK2P25098 689 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 YWHAGP61981 247 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCLT1-208ENST00000506368 COG7P83436 770 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 HADHQ16836 314 aaKnown RBP16.45■□□□□ 0.22
SCLT1-208ENST00000506368 ATP13A4Q4VNC1 1196 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 DNAJC24Q6P3W2 148 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 ZSWIM2Q8NEG5 633 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 CEP70Q8NHQ1 597 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 SPIRE2Q8WWL2 714 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 RTKNQ9BST9 563 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 KLHL11Q9NVR0 708 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 VPS28Q9UK41 221 aa16.45■□□□□ 0.22
SCLT1-208ENST00000506368 FAF1Q9UNN5 650 aaPredicted RBP16.45■□□□□ 0.22
SCLT1-208ENST00000506368 CAPN8A6NHC0 703 aa16.44■□□□□ 0.22
SCLT1-208ENST00000506368 ZNF701M0R085 212 aaPredicted RBP16.44■□□□□ 0.22
SCLT1-208ENST00000506368 SIN3BO75182 1162 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms