RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 DCAF17Q5H9S7 520 aaPredicted RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 PLEKHA7Q6IQ23 1121 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 C11orf63Q6NUN7 778 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 GPR142Q7Z601 462 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 ANKRD23Q86SG2 305 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 ERMNQ8TAM6 284 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 KBTBD7Q8WVZ9 684 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 PEBP4Q96S96 227 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 PKMYT1Q99640 499 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 WDR12Q9GZL7 423 aaKnown RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 SMYD2Q9NRG4 433 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 CGNQ9P2M7 1197 aaKnown RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 VPS13AQ96RL7 3174 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 TULP2O00295 520 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 INMTO95050 263 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 MMP3P08254 477 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 TPM4P67936 248 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 CDR2Q01850 454 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 SOX4Q06945 474 aaPredicted RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 STXBP2Q15833 593 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 GNASQ5JWF2 1037 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF618Q5T7W0 954 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 GBP6Q6ZN66 633 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 INTS8Q75QN2 995 aaKnown RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 NEK11Q8NG66 645 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 ZSCAN18Q8TBC5 510 aaPredicted RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 CEP170P1Q96L14 293 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 SLC6A18Q96N87 628 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 CELF4Q9BZC1 486 aaKnown RBP6.25□□□□□ -1.41
SCLT1-207ENST00000506233 GIT1Q9Y2X7 761 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 GBF1Q92538 1859 aa6.25□□□□□ -1.41
SCLT1-207ENST00000506233 J3QW42 95 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 GGPS1O95749 300 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 LGALS2P05162 132 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF286BP0CG31 522 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 KLRC2P26717 231 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 PSMC4P43686 418 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 GABRB2P47870 512 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 IREB2P48200 963 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 RAD23BP54727 409 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 RPL7AP62424 266 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF200P98182 395 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 MYL7Q01449 175 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CYP4F3Q08477 520 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 IKQ13123 557 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 MAMLD1Q13495 774 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CASP8Q14790 479 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 FILIP1LQ4L180 1135 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 PRAMEF19Q5SWL8 479 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 SEPT14Q6ZU15 432 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 PAQR9Q6ZVX9 377 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 PRICKLE2Q7Z3G6 844 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 VN1R5Q7Z5H4 357 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 MCOLN2Q8IZK6 566 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ABRAQ8N0Z2 381 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF276Q8N554 614 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ANKLE1Q8NAG6 615 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 BTN2A2Q8WVV5 523 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 KIFAP3Q92845 792 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 SLCO2A1Q92959 643 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ARL8AQ96BM9 186 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF419Q96HQ0 510 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 FAM213AQ9BRX8 229 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CDT1Q9H211 546 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 TMEM206Q9H813 350 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 UBE2TQ9NPD8 197 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CNOT8Q9UFF9 292 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 NUMBLQ9Y6R0 609 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ARHGEF35A5YM69 484 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 NFICP08651 508 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 MAGEA1P43355 309 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 STIM1Q13586 685 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 KIAA0753Q2KHM9 967 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 TRIM71Q2Q1W2 868 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 XKR9Q5GH70 373 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 HFE2Q6ZVN8 426 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 TBC1D1Q86TI0 1168 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 PRUNE1Q86TP1 453 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CDR2LQ86X02 465 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 OR8H2Q8N162 312 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 GPD1LQ8N335 351 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 SLC4A11Q8NBS3 891 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 RNF169Q8NCN4 708 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 VOPP1Q96AW1 172 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CYFIP2Q96F07 1278 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CDK5RAP3Q96JB5 506 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 TRMT13Q9NUP7 481 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 GTF3C4Q9UKN8 822 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 KIAA0391O15091 583 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 B4GALT4O60513 344 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ZIC2O95409 532 aaPredicted RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 PRIM2P49643 509 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 GUCY2DQ02846 1103 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 DENND5AQ6IQ26 1287 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 MTHFD1LQ6UB35 978 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms