RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SLC39A12Q504Y0 691 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 LACTB2Q53H82 288 aaPredicted RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 NT5DC1Q5TFE4 455 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 OVOS1Q6IE37 1185 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 PPP1R18Q6NYC8 613 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TMTC3Q6ZXV5 915 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 FAM124AQ86V42 546 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CACUL1Q86Y37 369 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TMEM25Q86YD3 366 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 FTSJ3Q8IY81 847 aaKnown RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 NSUN7Q8NE18 718 aaKnown RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 WDR36Q8NI36 951 aaKnown RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 EXOC6Q8TAG9 804 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 ETNPPLQ8TBG4 499 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CPT1CQ8TCG5 803 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 BSNDQ8WZ55 320 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 WBP2Q969T9 261 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 EVI5LQ96CN4 794 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 SIPA1Q96FS4 1042 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 LZTS2Q9BRK4 669 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TEKT3Q9BXF9 490 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 ACE2Q9BYF1 805 aaPredicted RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 GZF1Q9H116 711 aaPredicted RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 OSBPL2Q9H1P3 480 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 IL25Q9H293 177 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TRPC7Q9HCX4 862 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 DLL4Q9NR61 685 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TMLHEQ9NVH6 421 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 PRMT7Q9NVM4 692 aaPredicted RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 UCKL1Q9NWZ5 548 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.61□□□□□ -1.83
TCOF1-208ENST00000506063 DEC1Q9P2X7 70 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TCEAL9Q9UHQ7 104 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 VAV3Q9UKW4 847 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 MAP4K5Q9Y4K4 846 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 STON1Q9Y6Q2 735 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CNTRLQ7Z7A1 2325 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 TGP01266 2768 aa3.61□□□□□ -1.83
TCOF1-208ENST00000506063 CCDC187A0A096LP49 1063 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ACKR2O00590 384 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 PLD2O14939 933 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 NVLO15381 856 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CACNG3O60359 315 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 GREM1O60565 184 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 SORBS2O94875 1100 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 FSBPO95073 299 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 SIX3O95343 332 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 NADKO95544 446 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CYP11A1P05108 521 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CSH1P0DML2 217 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CSH2P0DML3 217 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 HDCP19113 662 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 PRKCHP24723 683 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 LRPAP1P30533 357 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 YWHABP31946 246 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 HSPA4P34932 840 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 GRM5P41594 1212 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ARRB1P49407 418 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ARSDP51689 593 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 NAPAP54920 295 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 C21orf59P57076 290 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 GAD2Q05329 585 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 TFDP1Q14186 410 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ZBTB6Q15916 424 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CCDC142Q17RM4 750 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 DCAF4L1Q3SXM0 396 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 PRR30Q53SZ7 412 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 MANEAQ5SRI9 462 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 SP5Q6BEB4 398 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 FOXR1Q6PIV2 292 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 DHX32Q7L7V1 743 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 TMPRSS9Q7Z410 1059 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ADAT2Q7Z6V5 191 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 B3GNT8Q7Z7M8 397 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ZFAND4Q86XD8 727 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 C4orf19Q8IY42 314 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 MB21D2Q8IYB1 491 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 EXOC8Q8IYI6 725 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ZNF295-AS1Q8N0V1 137 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ZNF276Q8N554 614 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CTCFLQ8NI51 663 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 SPPL2BQ8TCT7 592 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 PRCCQ92733 491 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 ARRDC3Q96B67 414 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 APOLD1Q96LR9 279 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 HEXIM2Q96MH2 286 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 PKMYT1Q99640 499 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 DUSP9Q99956 384 aaKnown RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 DSCC1Q9BVC3 393 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 TRIM8Q9BZR9 551 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 CDT1Q9H211 546 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 DCTPP1Q9H773 170 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 GDF3Q9NR23 364 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 SLC38A7Q9NVC3 462 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 BARHL2Q9NY43 387 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 FOXJ2Q9P0K8 574 aa3.6□□□□□ -1.83
TCOF1-208ENST00000506063 THAP10Q9P2Z0 257 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 MAGED2Q9UNF1 606 aaPredicted RBP3.6□□□□□ -1.83
TCOF1-208ENST00000506063 DAAM1Q9Y4D1 1078 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms