RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NPSP0C0P6 89 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 DRD4P21917 467 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 SLC5A2P31639 672 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 HMGA2P52926 109 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 SUMO2P61956 95 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 PSG6Q00889 435 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 DEUP1Q05D60 604 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 MTAPQ13126 283 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 ATP1A4Q13733 1029 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 SPARCL1Q14515 664 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 ELF2Q15723 593 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 PFKFB4Q16877 469 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 AARS2Q5JTZ9 985 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 FAM83BQ5T0W9 1011 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 NAPRTQ6XQN6 538 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 TIMP4Q99727 224 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 MACROD1Q9BQ69 325 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 KLK15Q9H2R5 256 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 PTPRHQ9HD43 1115 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 TRIM36Q9NQ86 728 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 ZNHIT2Q9UHR6 403 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 ADAM21Q9UKJ8 722 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 ASAP1Q9ULH1 1129 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 DTNAQ9Y4J8 743 aa4.74□□□□□ -1.65
TOPBP1-204ENST00000505804 OR2W5A6NFC9 320 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 LGALS16A8MUM7 142 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 ZNF213O14771 459 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 NPC1O15118 1278 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 USP1O94782 785 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 WDR47O94967 919 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 FGAP02671 866 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 TMEM225BP0DP42 221 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 FPR3P25089 353 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 PDIA3P30101 505 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 MCM5P33992 734 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 PBX1P40424 430 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 TRAPPC10P48553 1259 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 ICA1Q05084 483 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 NSUN2Q08J23 767 aaKnown RBP eCLIP4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 GALNT1Q10472 559 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 CLCA4Q14CN2 919 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 ACOX1Q15067 660 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 ARL6IP4Q66PJ3 421 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 GRHL2Q6ISB3 625 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 CCDC174Q6PII3 467 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 MTHFD1LQ6UB35 978 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 PTCHD4Q6ZW05 846 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 SLC29A4Q7RTT9 530 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 ARHGEF25Q86VW2 580 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 RASGRP3Q8IV61 690 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 ATG16L2Q8NAA4 619 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 STYXQ8WUJ0 223 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 UROC1Q96N76 676 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 THAP7Q9BT49 309 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 SCAF8Q9UPN6 1271 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 INSL6Q9Y581 213 aa4.73□□□□□ -1.65
TOPBP1-204ENST00000505804 A8MVJ9 347 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 M0R3H8 397 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 CA12O43570 354 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 EXOC3O60645 756 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 CBFA2T3O75081 653 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 SKAP2O75563 359 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 TNFRSF6BO95407 300 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 NTSR2O95665 410 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 MYCLP12524 364 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 BMP5P22003 454 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 DIO1P49895 249 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 CYP4F2P78329 520 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 TUBB8Q3ZCM7 444 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 ZACNQ401N2 412 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 CCDC38Q502W7 563 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 RNASE12Q5GAN4 147 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 AMIGO2Q86SJ2 522 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 PRR11Q96HE9 360 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 VPS50Q96JG6 964 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 WDR24Q96S15 920 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 PRPF18Q99633 342 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 RIOX1Q9H6W3 641 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 TMEM8AQ9HCN3 771 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 SEMA4GQ9NTN9 838 aa4.72□□□□□ -1.65
TOPBP1-204ENST00000505804 PNMA6EA0A0J9YXQ4 647 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 J3KTA2 159 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 SUV39H1O43463 412 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 ASNA1O43681 348 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 NUDT3O95989 172 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 WT1P19544 449 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 GPD1P21695 349 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 DRD1P21728 446 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 SOX10P56693 466 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 LMAN2Q12907 356 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 PTK2BQ14289 1009 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 GRM4Q14833 912 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 KRT72Q14CN4 511 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 ST3GAL2Q16842 350 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 AASDHQ4L235 1098 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 TMEM196Q5HYL7 178 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 STRIP1Q5VSL9 837 aa4.71□□□□□ -1.66
TOPBP1-204ENST00000505804 CEP85Q6P2H3 762 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms