RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 PSEN1P49768 467 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 MESP2Q0VG99 397 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 BYSLQ13895 437 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 PMS2CLQ68D20 193 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 KLHDC10Q6PID8 442 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 GPRIN1Q7Z2K8 1008 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 TMEM25Q86YD3 366 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 ETFBKMTQ8IXQ9 262 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 WHAMMQ8TF30 809 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 SPACA7Q96KW9 195 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 XPO6Q96QU8 1125 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 DUSP16Q9BY84 665 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 GOLPH3LQ9H4A5 285 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 SMOC1Q9H4F8 434 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 RMND1Q9NWS8 449 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 BCCIPQ9P287 314 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 WDR35Q9P2L0 1181 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
PDLIM7-214ENST00000505746 TM4SF5O14894 197 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 CYP26A1O43174 497 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 MAP3K13O43283 966 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 EPB41P11171 864 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 RALAP11233 206 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 RARGP13631 454 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 KCNA4P22459 653 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 KIF11P52732 1056 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 RNF43Q68DV7 783 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 GRAMD4Q6IC98 578 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 SFTPA1Q8IWL2 248 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 PGBD3Q8N328 593 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 PHTF2Q8N3S3 785 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 ZNF276Q8N554 614 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 TERB1Q8NA31 727 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 OLIG1Q8TAK6 271 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 WBP2Q969T9 261 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 CDK5RAP1Q96SZ6 601 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 FAM124BQ9H5Z6 455 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 NAGPAQ9UK23 515 aa12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-214ENST00000505746 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 A0A1W2PQH9 124 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 GOLGA6L4A6NEF3 574 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 KHNYNO15037 678 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 ZBTB24O43167 697 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 GREM1O60565 184 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 ADAM23O75077 832 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 HNRNPLP14866 589 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 P2RY2P41231 377 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 DHPSP49366 369 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 MXI1P50539 228 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 SLC8A3P57103 927 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 C10orf120Q5SQS8 335 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 C10orf76Q5T2E6 689 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 PPP1R26Q5T8A7 1209 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 TCEAL6Q6IPX3 200 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 SDE2Q6IQ49 451 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 HMGB4Q8WW32 186 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 TCEAL3Q969E4 200 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 TMEM176AQ96HP8 235 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 TSG101Q99816 390 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 EDEM2Q9BV94 578 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 BBS2Q9BXC9 721 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 NMUR1Q9HB89 426 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 DNAJC17Q9NVM6 304 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 CLIC5Q9NZA1 410 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 MARK1Q9P0L2 795 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 ZNF510Q9Y2H8 683 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 STARD13Q9Y3M8 1113 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 USP3Q9Y6I4 520 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 PTPRDP23468 1912 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
PDLIM7-214ENST00000505746 ANAPC1Q9H1A4 1944 aa12.69□□□□□ -0.38
PDLIM7-214ENST00000505746 TCRBV21S2A2A0A5A6 115 aa12.69□□□□□ -0.38
PDLIM7-214ENST00000505746 NEDD8-MDP1E9PL57 170 aa12.69□□□□□ -0.38
PDLIM7-214ENST00000505746 CACNG3O60359 315 aa12.69□□□□□ -0.38
PDLIM7-214ENST00000505746 TYRP14679 529 aa12.69□□□□□ -0.38
PDLIM7-214ENST00000505746 BCKDHBP21953 392 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms