RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 MED10Q9BTT4 135 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 B3GNT5Q9BYG0 378 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 CNGB3Q9NQW8 809 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 PADI3Q9ULW8 664 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 AP4E1Q9UPM8 1137 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 DCDC2CA8MYV0 355 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 HACD1B0YJ81 288 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 H7C0C1 242 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 CYP11A1P05108 521 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 PRKAR2AP13861 404 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 TKTP29401 623 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 ATP5OP48047 213 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 LONRF1Q17RB8 773 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 AGMOQ6ZNB7 445 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 BNIPLQ7Z465 357 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 TADA2BQ86TJ2 420 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 SCML4Q8N228 414 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 SELENOSQ9BQE4 189 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 FERMT1Q9BQL6 677 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 NRDE2Q9H7Z3 1164 aa17.98■□□□□ 0.47
TRAPPC11-204ENST00000505676 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 SMIM23A6NLE4 172 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 C9IYK1 514 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 ETS1P14921 441 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 CYP2F1P24903 491 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 L1CAMP32004 1257 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 ARL4AP40617 200 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 MAGEA6P43360 314 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 ADIGQ0VDE8 80 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 MMRN1Q13201 1228 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 MAPRE1Q15691 268 aaKnown RBP17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 UPP1Q16831 310 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 MAP3K21Q5TCX8 1036 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 CLEC20AQ6ZU45 233 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 UNC45BQ8IWX7 931 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 FAM71DQ8N9W8 422 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 PCDH19Q8TAB3 1148 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 UHMK1Q8TAS1 419 aaKnown RBP17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 CCT8L2Q96SF2 557 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 SEZ6LQ9BYH1 1024 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 POPDC2Q9HBU9 364 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 INTS9Q9NV88 658 aaKnown RBP17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
TRAPPC11-204ENST00000505676 EXOC1LA0A1B0GW35 172 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZBED1O96006 694 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SLCO1A2P46721 670 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 GDF10P55107 478 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 IFI35P80217 286 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ADCY1Q08828 1119 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 PDIA2Q13087 525 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 KLHL38Q2WGJ6 581 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 MDH1BQ5I0G3 518 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 TTC19Q6DKK2 380 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZNF473Q8WTR7 871 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 IRGQQ8WZA9 623 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 WNT8BQ93098 351 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SMARCD1Q96GM5 515 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 C9orf72Q96LT7 481 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 EURLQ9NYK6 297 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SAE1Q9UBE0 346 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 RSPH14Q9UHP6 348 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 C5orf60A6NFR6 353 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 CHN1P15882 459 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 CCT5P48643 541 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SULT1E1P49888 294 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SLC18A1P54219 525 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ITGA7Q13683 1181 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SKIDA1Q1XH10 827 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZC3H12AQ5D1E8 599 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 FAM35AQ86V20 835 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 EXOC3L1Q86VI1 746 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 NPY6RQ99463 290 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ACBD6Q9BR61 282 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 KLC2Q9H0B6 622 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 AGO3Q9H9G7 860 aaKnown RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 PNPLA8Q9NP80 782 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 SRRDQ9UH36 339 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 ZMYND8Q9ULU4 1186 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 FZD10Q9ULW2 581 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 RAD54BQ9Y620 910 aa17.96■□□□□ 0.47
TRAPPC11-204ENST00000505676 H3BRJ5 948 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 HCRTO43612 131 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CLCNKBP51801 687 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 TUSC3Q13454 348 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 RAB41Q5JT25 222 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PAQR9Q6ZVX9 377 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PAXIP1Q6ZW49 1069 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PRUNE1Q86TP1 453 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 ZBED8Q8IZ13 594 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 DEFB106AQ8N104 65 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PXYLP1Q8TE99 480 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 PYROXD1Q8WU10 500 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 NTAN1Q96AB6 310 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 FAM149B1Q96BN6 582 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 CHMP6Q96FZ7 201 aa17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 DHX35Q9H5Z1 703 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-204ENST00000505676 LRRC4CQ9HCJ2 640 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms