RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 TMEM192Q8IY95 271 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ADGRF2Q8IZF7 708 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ECSITQ9BQ95 431 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 IQCGQ9H095 443 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 FZD1Q9UP38 647 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 HBS1LQ9Y450 684 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 CHADO15335 359 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ITM2AO43736 263 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 BAG2O95816 211 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 C6orf222P0C671 652 aaPredicted RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 PRKCHP24723 683 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 RBL1P28749 1068 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 IRX4P78413 519 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 CDC16Q13042 620 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 TRPC3Q13507 836 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 TUBB3Q13509 450 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 MROH9Q5TGP6 573 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 UNC5BQ8IZJ1 945 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 ZFAND2BQ8WV99 257 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 FGD4Q96M96 766 aa12.35□□□□□ -0.43
UBE3D-206ENST00000505226 CPSF3Q9UKF6 684 aaKnown RBP12.35□□□□□ -0.43
UBE3D-206ENST00000505226 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SLC15A5A6NIM6 579 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 H7C0C1 242 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 I3L4J1 428 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 KCNN4O15554 427 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 PEX10O60683 326 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 LYPLA1O75608 230 aaPredicted RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 GSTA2P09210 222 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 GRIA1P42261 906 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 ATP5OP48047 213 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 RBBP5Q15291 538 aaKnown RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 TARBP2Q15633 366 aaKnown RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 UNC5AQ6ZN44 842 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 PLD5Q8N7P1 536 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 TRAPPC9Q96Q05 1148 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 EBF3Q9H4W6 596 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SLC17A6Q9P2U8 582 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SDR42E2A6NKP2 422 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 TOM1L1O75674 476 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 GRAP2O75791 330 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 APRTP07741 180 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 CRABP2P29373 138 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
UBE3D-206ENST00000505226 RALGPS1Q5JS13 557 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 C1orf146Q5VVC0 180 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF534Q76KX8 674 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SLC4A11Q8NBS3 891 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 USP6NLQ92738 828 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 AZIN2Q96A70 460 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 RSAD1Q9HA92 442 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 SIX4Q9UIU6 781 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
UBE3D-206ENST00000505226 LGR5O75473 907 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 KRT37O76014 449 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 BPGMP07738 259 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 DSG1Q02413 1049 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 LRRC36Q1X8D7 754 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 TRMT5Q32P41 509 aaKnown RBP12.33□□□□□ -0.44
UBE3D-206ENST00000505226 NDUFAF2Q8N183 169 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ARHGAP24Q8N264 748 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 PQLC3Q8N755 202 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 POU5F2Q8N7G0 328 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 MTMR14Q8NCE2 650 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 UBA3Q8TBC4 463 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 PYDC1Q8WXC3 89 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 MTBPQ96DY7 904 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 WWP1Q9H0M0 922 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ANGPTL2Q9UKU9 493 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 HEY1Q9Y5J3 304 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 LCTP09848 1927 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 MICAL2O94851 1124 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 HMGCRP04035 888 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 CDO1Q16878 200 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 C16orf46Q6P387 395 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ZPBP2Q6X784 338 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 RILPQ96NA2 401 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 NR1H4Q96RI1 486 aaPredicted RBP12.33□□□□□ -0.44
UBE3D-206ENST00000505226 MAGEB5Q9BZ81 275 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ETAA1Q9NY74 926 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 SPAG6O75602 509 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
UBE3D-206ENST00000505226 APOEP02649 317 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 GJB1P08034 283 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 ADORA2AP29274 412 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 GMPRP36959 345 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 AP3M2P53677 418 aa12.33□□□□□ -0.44
UBE3D-206ENST00000505226 CNTN2Q02246 1040 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms