RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ITFG1Q8TB96 612 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 UBA3Q8TBC4 463 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 TCEAL4Q96EI5 215 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 SPAG5Q96R06 1193 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 MYADMQ96S97 322 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 SLC46A2Q9BY10 475 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 MIS12Q9H081 205 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.024e-8■■■■■ 61.6
CDC42SE2-208ENST00000505065 SLC2A4RGQ9NR83 387 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ABCC13Q9NSE7 274 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 OLA1Q9NTK5 396 aaKnown RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 CDH7Q9ULB5 785 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 HBS1LQ9Y450 684 aaKnown RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 A0A0A0MRY4 1105 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 HSF2BPO75031 334 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ARHGAP25P42331 645 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 TKTL1P51854 596 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 YWHAGP61981 247 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 OGDHQ02218 1023 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 HFE2Q6ZVN8 426 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 CPXM2Q8N436 756 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 TSC1Q92574 1164 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 LRRC3BQ96PB8 259 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 PHF7Q9BWX1 381 aaPredicted RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ULBP1Q9BZM6 244 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 RNF38Q9H0F5 515 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 GMIPQ9P107 970 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 CCL16O15467 120 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 SKILP12757 684 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 MATKP42679 507 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 CXCR3P49682 368 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 AIF1P55008 147 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 MTA1Q13330 715 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 STRADAQ7RTN6 431 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 CACNA2D4Q7Z3S7 1137 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ADHFE1Q8IWW8 467 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZSWIM3Q96MP5 696 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 TLR6Q9Y2C9 796 aa8.69□□□□□ -1.02
CDC42SE2-208ENST00000505065 COCHO43405 550 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 GRIK1P39086 918 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 TAF10Q12962 218 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 HS1BP3Q53T59 392 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 EFHC1Q5JVL4 640 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 LIN9Q5TKA1 542 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 PSTKQ8IV42 348 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 CMTM8Q8IZV2 173 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 NTAN1Q96AB6 310 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 PLD4Q96BZ4 506 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 POPDC2Q9HBU9 364 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 ASAH2Q9NR71 780 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 C10orf142B7Z368 130 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 NDUFA10O95299 355 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 LRG1P02750 347 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 LAMP2P13473 410 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 PPP2R5DQ14738 602 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 SLC25A52Q3SY17 297 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 CCDC14Q49A88 953 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 TLR8Q9NR97 1041 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 UVRAGQ9P2Y5 699 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 HESX1Q9UBX0 185 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 PLXNA2O75051 1894 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 A0A1W2PQH9 124 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 SPATA31D3P0C874 917 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 FSHRP23945 695 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZNF143P52747 638 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 CCDC173Q0VFZ6 552 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 MGAT5BQ3V5L5 792 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 SPATA31D4Q6ZUB0 917 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 USP13Q92995 863 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 ASB2Q96Q27 587 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 UNC80Q8N2C7 3258 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 PRRG1O14668 218 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 LTFP02788 710 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 NOS2P35228 1153 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 SNX16P57768 344 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 RARS2Q5T160 578 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 NAA35Q5VZE5 725 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 C11orf63Q6NUN7 778 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 GRASPQ7Z6J2 395 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 RBM23Q86U06 439 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 C18orf8Q96DM3 657 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 ARHGEF26Q96DR7 871 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 C1orf74Q96LT6 269 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 ZNF512Q96ME7 567 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 FAM83CQ9BQN1 747 aa8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-208ENST00000505065 TRIOBPQ9H2D6 2365 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 C2orf78A6NCI8 922 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 IRAK2O43187 625 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 SLC25A11Q02978 314 aaKnown RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 GFPT1Q06210 699 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 LLGL2Q6P1M3 1020 aa8.67□□□□□ -1.02
CDC42SE2-208ENST00000505065 CPA5Q8WXQ8 436 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms