RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ARFGEF2Q9Y6D5 1785 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 EIF5BO60841 1220 aaKnown RBP5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 POU2F2P09086 479 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 TYRP14679 529 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 ITGALP20701 1170 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 HMGB2P26583 209 aaKnown RBP5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 MTX1Q13505 466 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 BMPR2Q13873 1038 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 EPHA10Q5JZY3 1008 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZNF626Q68DY1 528 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 TMEM108Q6UXF1 575 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 MIER2Q8N344 545 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 CELF5Q8N6W0 485 aaKnown RBP5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 PLBD2Q8NHP8 589 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 RGMAQ96B86 450 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 SMAD5Q99717 465 aaKnown RBP5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 USP44Q9H0E7 712 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 WDCPQ9H6R7 721 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 DLL3Q9NYJ7 618 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 TRPC5Q9UL62 973 aaPredicted RBP5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 PCDHA1Q9Y5I3 950 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 NUP188Q5SRE5 1749 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 RREB1Q92766 1687 aa5.85□□□□□ -1.47
DEPDC1B-203ENST00000505017 AFDNP55196 1824 aaKnown RBP5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 ALG1L2C9J202 215 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 H0YIZ8 118 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 M0QYG6 137 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 GRM8O00222 908 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 PIM1P11309 404 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 HDCP19113 662 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 FAM153CQ494X1 144 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 HSP90AB4PQ58FF6 505 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 RNF187Q5TA31 235 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 C11orf87Q6NUJ2 197 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 COPS6Q7L5N1 327 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 ZNF551Q7Z340 670 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 CHD1LQ86WJ1 897 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 C9orf106Q8NAJ2 232 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 FAM46DQ8NEK8 389 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 ARHGEF3Q9NR81 526 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 C9orf78Q9NZ63 289 aaPredicted RBP5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 TJP1Q07157 1748 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 NHSQ6T4R5 1651 aa5.84□□□□□ -1.47
DEPDC1B-203ENST00000505017 AFF2P51816 1311 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 SLC16A6O15403 523 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 FTLP02792 175 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 IL6RP08887 468 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 PRR35P0CG20 571 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 MYL6BP14649 208 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 SFPQP23246 707 aaKnown RBP eCLIP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 IL6STP40189 918 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 RECQLP46063 649 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 CLCN2P51788 898 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 KRTAP10-9P60411 292 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 NKX6-1P78426 367 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 KLF9Q13886 244 aaPredicted RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 SRSF7Q16629 238 aaKnown RBP eCLIP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 HSP90AB3PQ58FF7 597 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 MTX3Q5HYI7 312 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 DTX2Q86UW9 622 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 SLC46A1Q96NT5 459 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 MACROD1Q9BQ69 325 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 GTPBP4Q9BZE4 634 aaKnown RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 LMBRD1Q9NUN5 540 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 HESX1Q9UBX0 185 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 ASAP1Q9ULH1 1129 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 LRRFIP2Q9Y608 721 aaKnown RBP5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 ANKRD36CQ5JPF3 1778 aa5.83□□□□□ -1.48
DEPDC1B-203ENST00000505017 ZNF804BA4D1E1 1349 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 ERVV-1B6SEH8 477 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 SOAT2O75908 522 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 ARIH2O95376 493 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 IGKV5-2P06315 115 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 CYP19A1P11511 503 aaPredicted RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 AIMP1Q12904 312 aaKnown RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 SLC10A2Q12908 348 aaPredicted RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 GRM1Q13255 1194 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 GCKRQ14397 625 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 PLS1Q14651 629 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 EZH2Q15910 746 aaKnown RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 BMP2KLQ5H9B9 411 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 ANKRD45Q5TZF3 282 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 KIAA1614Q5VZ46 1190 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 FAM160B1Q5W0V3 765 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 KIF6Q6ZMV9 814 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 ERC1Q8IUD2 1116 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 CPA6Q8N4T0 437 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 CCDC191Q8NCU4 936 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 SH2D3AQ9BRG2 576 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 QTRT1Q9BXR0 403 aaKnown RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 BTBD3Q9Y2F9 522 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 NOP58Q9Y2X3 529 aaKnown RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 SBF2Q86WG5 1849 aa5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 COL5A3P25940 1745 aaPredicted RBP5.82□□□□□ -1.48
DEPDC1B-203ENST00000505017 PALLDQ8WX93 1383 aa5.81□□□□□ -1.48
DEPDC1B-203ENST00000505017 BTAF1O14981 1849 aa5.81□□□□□ -1.48
DEPDC1B-203ENST00000505017 MAP3K15Q6ZN16 1313 aa5.81□□□□□ -1.48
DEPDC1B-203ENST00000505017 A1BGP04217 495 aa5.81□□□□□ -1.48
DEPDC1B-203ENST00000505017 FAM163BP0C2L3 166 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms