RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 SV2AQ7L0J3 742 aa22.72■■□□□ 1.23
RNF4-205ENST00000504224 TRMT11Q7Z4G4 463 aaKnown RBP22.72■■□□□ 1.23
RNF4-205ENST00000504224 UNC93AQ86WB7 457 aa22.72■■□□□ 1.23
RNF4-205ENST00000504224 TMC2Q8TDI7 906 aa22.72■■□□□ 1.23
RNF4-205ENST00000504224 TAF4BQ92750 862 aa22.72■■□□□ 1.23
RNF4-205ENST00000504224 THADAQ6YHU6 1953 aa22.72■■□□□ 1.23
RNF4-205ENST00000504224 HLA-DRAP01903 254 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 WASP42768 502 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 NUCB2P80303 420 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 TRIM61Q5EBN2 209 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 SH3PXD2AQ5TCZ1 1133 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 GRAMD4Q6IC98 578 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 CRYBG2Q8N1P7 616 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 TERB1Q8NA31 727 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 NUSAP1Q9BXS6 441 aaKnown RBP22.71■■□□□ 1.23
RNF4-205ENST00000504224 CSNK1G1Q9HCP0 422 aa22.71■■□□□ 1.23
RNF4-205ENST00000504224 DNAJC17Q9NVM6 304 aaKnown RBP22.71■■□□□ 1.23
RNF4-205ENST00000504224 MBD1Q9UIS9 605 aaPredicted RBP22.71■■□□□ 1.23
RNF4-205ENST00000504224 NEDD8-MDP1E9PL57 170 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 TRIM24O15164 1050 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 CALUO43852 315 aaPredicted RBP22.7■■□□□ 1.22
RNF4-205ENST00000504224 ASS1P00966 412 aaKnown RBP22.7■■□□□ 1.22
RNF4-205ENST00000504224 MYL1P05976 194 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 PTGER3P43115 390 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 ASPAP45381 313 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 GOLGA8FQ08AF8 430 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 GOLGA8DPQ0D2H9 430 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 ZNF252P-AS1Q0IIN9 211 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 CCDC47Q96A33 483 aaKnown RBP22.7■■□□□ 1.22
RNF4-205ENST00000504224 IMPG2Q9BZV3 1241 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 LSM7Q9UK45 103 aaKnown RBP22.7■■□□□ 1.22
RNF4-205ENST00000504224 HPSEQ9Y251 543 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 MYOFQ9NZM1 2061 aa22.7■■□□□ 1.22
RNF4-205ENST00000504224 ATXN2Q99700 1313 aaKnown RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 CDX4O14627 284 aaPredicted RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 ZBTB24O43167 697 aaPredicted RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 CYP26A1O43174 497 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 HOXB2P14652 356 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 ATP5C1P36542 298 aaKnown RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 MAPK8P45983 427 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 VAMP7P51809 220 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 MAP7D1Q3KQU3 841 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 LYSMD4Q5XG99 296 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 TPGS1Q6ZTW0 290 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 HTR3DQ70Z44 454 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 GPRIN1Q7Z2K8 1008 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 SYT12Q8IV01 421 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 KCNV2Q8TDN2 545 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 ERLEC1Q96DZ1 483 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 CCDC34Q96HJ3 373 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 DUSP9Q99956 384 aaKnown RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 BBS2Q9BXC9 721 aa22.69■■□□□ 1.22
RNF4-205ENST00000504224 KLF16Q9BXK1 252 aaPredicted RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 KMT2BQ9UMN6 2715 aaPredicted RBP22.69■■□□□ 1.22
RNF4-205ENST00000504224 CHD8Q9HCK8 2581 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 LAMA1P25391 3075 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 A0A1W2PQ27 194 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 A0A1W2PQ64 194 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 A0A1W2PQD8 194 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 IKBKBO14920 756 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 ACO1P21399 889 aaKnown RBP22.68■■□□□ 1.22
RNF4-205ENST00000504224 NTSR1P30989 418 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 NDUFA8P51970 172 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 LMAN2Q12907 356 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 FOXC1Q12948 553 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 DEFB119Q8N690 84 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 TMEM174Q8WUU8 243 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 CYFIP2Q96F07 1278 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 XPO6Q96QU8 1125 aaKnown RBP22.68■■□□□ 1.22
RNF4-205ENST00000504224 TWNKQ96RR1 684 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 MMRN2Q9H8L6 949 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 GDPD2Q9HCC8 539 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 TMEM74BQ9NUR3 256 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 EVLQ9UI08 416 aaPredicted RBP22.68■■□□□ 1.22
RNF4-205ENST00000504224 SCML2Q9UQR0 700 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 NUP205Q92621 2012 aa22.68■■□□□ 1.22
RNF4-205ENST00000504224 MAP1BP46821 2468 aaKnown RBP22.68■■□□□ 1.22
RNF4-205ENST00000504224 GOLGA6L4A6NEF3 574 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 KIF20AO95235 890 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 CFIP05156 583 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 TRIM49P0CI25 452 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 TRIM49CP0CI26 452 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 TYRP14679 529 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 CD58P19256 250 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 GCLMP48507 274 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 RPL6Q02878 288 aaKnown RBP22.67■■□□□ 1.22
RNF4-205ENST00000504224 C1orf220Q5T0J3 134 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 EGFLAMQ63HQ2 1017 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 SDE2Q6IQ49 451 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 CLEC20AQ6ZU45 233 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 CHPFQ8IZ52 775 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 BHMTQ93088 406 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 HNRNPABQ99729 332 aaKnown RBP22.67■■□□□ 1.22
RNF4-205ENST00000504224 NT5C1AQ9BXI3 368 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 OSER1Q9NX31 292 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 CALCOCO1Q9P1Z2 691 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 WDR35Q9P2L0 1181 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 NUDT5Q9UKK9 219 aa22.67■■□□□ 1.22
RNF4-205ENST00000504224 A0A1W2PQH9 124 aa22.66■■□□□ 1.22
RNF4-205ENST00000504224 MDM4O15151 490 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms