RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 RARBP10826 455 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 CYP2F1P24903 491 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 SSTR1P30872 391 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 TRABD2AQ86V40 505 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 OTUD6BQ8N6M0 293 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 NDRG1Q92597 394 aaKnown RBP23.41■■□□□ 1.34
PCDH1-204ENST00000503492 CABS1Q96KC9 395 aa23.41■■□□□ 1.34
PCDH1-204ENST00000503492 DHX35Q9H5Z1 703 aaKnown RBP23.41■■□□□ 1.34
PCDH1-204ENST00000503492 KCNN4O15554 427 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 BEST1O76090 585 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 VIMP08670 466 aaKnown RBP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 CTSHP09668 335 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 RBL1P28749 1068 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 AFF1P51825 1210 aaKnown RBP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 PAQR9Q6ZVX9 377 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 FBXO36Q8NEA4 188 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 DUSP16Q9BY84 665 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 NRDE2Q9H7Z3 1164 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 FAM105AQ9NUU6 356 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 MTMR10Q9NXD2 777 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 RABGEF1Q9UJ41 708 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 FAM155AB1AL88 458 aaPredicted RBP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 ZNF487B1APH4 448 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 PTPN1P18031 435 aaKnown RBP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 MLH1P40692 756 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 KCNJ11Q14654 390 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 BBS9Q3SYG4 887 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 PIGWQ7Z7B1 504 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 PDIK1LQ8N165 341 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 CCDC185Q8N715 623 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 ATP11CQ8NB49 1132 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 TRIB2Q92519 343 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 RTP4Q96DX8 246 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 ARHGAP39Q9C0H5 1083 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 TSPYL2Q9H2G4 693 aaPredicted RBP23.4■■□□□ 1.34
PCDH1-204ENST00000503492 AP4E1Q9UPM8 1137 aa23.4■■□□□ 1.34
PCDH1-204ENST00000503492 GABRDO14764 452 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 CHRNA1P02708 482 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 ADIGQ0VDE8 80 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 PKN2Q16513 984 aaKnown RBP23.39■■□□□ 1.33
PCDH1-204ENST00000503492 EFHC2Q5JST6 749 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 EFHC1Q5JVL4 640 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 KIAA0319Q5VV43 1072 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 LRRN4Q8WUT4 740 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 MRRFQ96E11 262 aaKnown RBP23.39■■□□□ 1.33
PCDH1-204ENST00000503492 GAD1Q99259 594 aa23.39■■□□□ 1.33
PCDH1-204ENST00000503492 BCLAF3A2AJT9 711 aaKnown RBP23.38■■□□□ 1.33
PCDH1-204ENST00000503492 NR1H3Q13133 447 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 SYCP2LQ5T4T6 812 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 RNF187Q5TA31 235 aaPredicted RBP23.38■■□□□ 1.33
PCDH1-204ENST00000503492 C3orf62Q6ZUJ4 267 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 TAX1BP1Q86VP1 789 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 DEFB106AQ8N104 65 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 CKAP2Q8WWK9 683 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 LPPQ93052 612 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 KCTD15Q96SI1 283 aaPredicted RBP23.38■■□□□ 1.33
PCDH1-204ENST00000503492 SENP6Q9GZR1 1112 aaPredicted RBP23.38■■□□□ 1.33
PCDH1-204ENST00000503492 MIOSQ9NXC5 875 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 SLC24A2Q9UI40 661 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 GABRQQ9UN88 632 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 MATKP42679 507 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 LIG3P49916 1009 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 EFTUD2Q15029 972 aaKnown RBP eCLIP23.38■■□□□ 1.33
PCDH1-204ENST00000503492 GDAP1Q8TB36 358 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 SENP8Q96LD8 212 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 PAK5Q9P286 719 aa23.38■■□□□ 1.33
PCDH1-204ENST00000503492 CFAP69A5D8W1 941 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 ZBED1O96006 694 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 NPR3P17342 541 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 PHBP35232 272 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 RASA2Q15283 850 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 STRADAQ7RTN6 431 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 IGDCC3Q8IVU1 814 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 RASSF4Q9H2L5 321 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 PPCSQ9HAB8 311 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 RAB6BQ9NRW1 208 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 FAM163BP0C2L3 166 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 GBE1Q04446 702 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 SF3A3Q12874 501 aaKnown RBP eCLIP23.37■■□□□ 1.33
PCDH1-204ENST00000503492 SLC10A2Q12908 348 aaPredicted RBP23.37■■□□□ 1.33
PCDH1-204ENST00000503492 MDH1BQ5I0G3 518 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 RSPH3Q86UC2 560 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 FBF1Q8TES7 1133 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 ZIC5Q96T25 663 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 ELAC2Q9BQ52 826 aaKnown RBP23.37■■□□□ 1.33
PCDH1-204ENST00000503492 OSBPL7Q9BZF2 842 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 UPF3AQ9H1J1 476 aaKnown RBP23.37■■□□□ 1.33
PCDH1-204ENST00000503492 KIF9Q9HAQ2 790 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 SLC38A7Q9NVC3 462 aa23.37■■□□□ 1.33
PCDH1-204ENST00000503492 TCP11X1B4DZS4 312 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 CHADO15335 359 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 NDUFV1P49821 464 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 GEMIN4P57678 1058 aaKnown RBP23.36■■□□□ 1.33
PCDH1-204ENST00000503492 MFSD14CQ5VZR4 134 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 ARHGEF18Q6ZSZ5 1173 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 CLEC20AQ6ZU45 233 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 SERINC5Q86VE9 423 aa23.36■■□□□ 1.33
PCDH1-204ENST00000503492 PALM2Q8IXS6 379 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms