RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CYLDQ9NQC7 956 aa20.49■□□□□ 0.87
UBE2D3-215ENST00000503418 SPHK2Q9NRA0 654 aa20.49■□□□□ 0.87
UBE2D3-215ENST00000503418 NAGPAQ9UK23 515 aa20.49■□□□□ 0.87
UBE2D3-215ENST00000503418 MMP17Q9ULZ9 603 aa20.49■□□□□ 0.87
UBE2D3-215ENST00000503418 PSMA7O14818 248 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 MDM4O15151 490 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 RAD23BP54727 409 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 MRPS21P82921 87 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 CCDC6Q16204 474 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 CSRP2Q16527 193 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 C10orf120Q5SQS8 335 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 TTC30AQ86WT1 665 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 ALLCQ8N6M5 410 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 TPSD1Q9BZJ3 242 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 ARRDC1-AS1Q9H2J1 176 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 ARMCX3Q9UH62 379 aaPredicted RBP20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 EBF1Q9UH73 591 aa20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 LSM7Q9UK45 103 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-215ENST00000503418 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 DCLK1O15075 740 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 HOXC11O43248 304 aaPredicted RBP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 KLF8O95600 359 aaPredicted RBP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 GRIA2P42262 883 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 ATXN1P54253 815 aaKnown RBP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 ANO7Q6IWH7 933 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 KLHL10Q6JEL2 608 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 CCDC186Q7Z3E2 898 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 TMEM25Q86YD3 366 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 TXNDC5Q8NBS9 432 aaKnown RBP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 LOXL4Q96JB6 756 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 DUSP9Q99956 384 aaKnown RBP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 MAN1B1Q9UKM7 699 aa20.47■□□□□ 0.87
UBE2D3-215ENST00000503418 MYO18AQ92614 2054 aaKnown RBP20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 MED19A0JLT2 244 aaPredicted RBP20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 TBC1D3BA6NDS4 549 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 TULP3O75386 442 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 EPN2O95208 641 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 RALAP11233 206 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 PSEN1P49768 467 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 CUL2Q13617 745 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 EMC10Q5UCC4 262 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 HTR3DQ70Z44 454 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 TADA2BQ86TJ2 420 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 ETFBKMTQ8IXQ9 262 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 PHTF2Q8N3S3 785 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 IL17RCQ8NAC3 791 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 SLC35C1Q96A29 364 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 ZDHHC4Q9NPG8 344 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 DEC1Q9P2X7 70 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 DNMT3LQ9UJW3 386 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 INVSQ9Y283 1065 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 COQ4Q9Y3A0 265 aa20.46■□□□□ 0.87
UBE2D3-215ENST00000503418 NEDD8-MDP1E9PL57 170 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 GREM1O60565 184 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 CD44P16070 742 aaKnown RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 GBP1P32455 592 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 TNFRSF4P43489 277 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 PLA2G4AP47712 749 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 SLC8A3P57103 927 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 LRMPQ12912 555 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 ELF2Q15723 593 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 CRY1Q16526 586 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 PLK5Q496M5 336 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 CCDC40Q4G0X9 1142 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 PREPLQ4J6C6 727 aaPredicted RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 AASDHQ4L235 1098 aaPredicted RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 ARHGAP17Q68EM7 881 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 KLHDC10Q6PID8 442 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 TMEM92Q6UXU6 159 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 TPGS1Q6ZTW0 290 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 SCD5Q86SK9 330 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 MIB1Q86YT6 1006 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 MDGA1Q8NFP4 955 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 NETO1Q8TDF5 533 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 DHTKD1Q96HY7 919 aaPredicted RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 ZC3H10Q96K80 434 aaKnown RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 RTKNQ9BST9 563 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 BBS2Q9BXC9 721 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 FAM124BQ9H5Z6 455 aaPredicted RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 METTL14Q9HCE5 456 aaKnown RBP20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 RASAL2Q9UJF2 1139 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 USP3Q9Y6I4 520 aa20.45■□□□□ 0.86
UBE2D3-215ENST00000503418 CACNA1AO00555 2505 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 A0A0A0MRY4 1105 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 SGK1O00141 431 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 GDF9O60383 454 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 ALDH1A2O94788 518 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 PPP1R2P41236 205 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 KIR2DL1P43626 348 aaPredicted RBP20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 YWHAEP62258 255 aaKnown RBP20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 SF3A2Q15428 464 aaKnown RBP20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 GOLGA7BQ2TAP0 167 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 HSF5Q4G112 596 aaPredicted RBP20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 USP39Q53GS9 565 aaKnown RBP20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 EOGTQ5NDL2 527 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 NUDT18Q6ZVK8 323 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 PIGZQ86VD9 579 aa20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 ELOA2Q8IYF1 753 aaPredicted RBP20.44■□□□□ 0.86
UBE2D3-215ENST00000503418 C12orf50Q8NA57 414 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms