RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ALDH1A3P47895 512 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 PPP3CCP48454 512 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 MARCKSL1P49006 195 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 NDUFV1P49821 464 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 SULT1E1P49888 294 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CACNA2D1P54289 1103 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 HDAC4P56524 1084 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 YWHAGP61981 247 aaKnown RBP eCLIP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ATP11AP98196 1134 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 LMNB2Q03252 620 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 DEUP1Q05D60 604 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 C2orf54Q08AI8 447 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 DHX34Q14147 1143 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 TFDP2Q14188 446 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 VEPH1Q14D04 833 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 TAF5Q15542 800 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CYP1B1Q16678 543 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CDO1Q16878 200 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 C15orf59Q2T9L4 293 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ERMARDQ5T6L9 678 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 BSPRYQ5W0U4 402 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 BTBD8Q5XKL5 378 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 PDE12Q6L8Q7 609 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 TRNP1Q6NT89 227 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 C8orf74Q6P047 294 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 SCYL2Q6P3W7 929 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 PRSS55Q6UWB4 352 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 GPRIN1Q7Z2K8 1008 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 BNIPLQ7Z465 357 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ARFGAP1Q8N6T3 406 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 GRK7Q8WTQ7 553 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RNF139Q8WU17 664 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 NTAN1Q96AB6 310 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ABHD8Q96I13 439 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 B3GALT6Q96L58 329 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 PGLYRP2Q96PD5 576 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 SLITRK1Q96PX8 696 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 SEPT5Q99719 369 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CLSTN3Q9BQT9 956 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF670Q9BS34 389 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 VN1R3Q9BXE9 311 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 MAK16Q9BXY0 300 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RHOBTB2Q9BYZ6 727 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZBP1Q9H171 429 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZWILCHQ9H900 591 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 TLR8Q9NR97 1041 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RBM12Q9NTZ6 932 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 TMEM30AQ9NV96 361 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CLIC5Q9NZA1 410 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 CXXC1Q9P0U4 656 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RCOR3Q9P2K3 495 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 UXTQ9UBK9 157 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 ZMYND8Q9ULU4 1186 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 IRAK3Q9Y616 596 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 VWA8A3KMH1 1905 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 DNAH12Q6ZR08 3092 aa8.48□□□□□ -1.05
TOPBP1-202ENST00000503338 hCG_1818297A0A087WSY0 165 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 FAM187AA6NFU0 413 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 M0QYT0 321 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 PHF2O75151 1096 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ERLIN1O75477 346 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ADH1AP07327 375 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 LINC00271P0C7V0 271 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 RARAP10276 462 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC2A3P11169 496 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 IL1R2P27930 398 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 HTR7P34969 479 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 CTNNB1P35222 781 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 CDKN2BP42772 138 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 KPNA1P52294 538 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 EPHB4P54760 987 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SCAPQ12770 1279 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 DUSP4Q13115 394 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 KLF1Q13351 362 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 NNTQ13423 1086 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 KRT81Q14533 505 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ELF2Q15723 593 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 DPYSL2Q16555 572 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 DDR2Q16832 855 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ERCC6LQ2NKX8 1250 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 MAP9Q49MG5 647 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 EFHC2Q5JST6 749 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 BRMS1LQ5PSV4 323 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 WDR93Q6P2C0 686 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 DRICH1Q6PGQ1 229 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SPOCD1Q6ZMY3 1216 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 CCDC149Q6ZUS6 474 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 SYDE1Q6ZW31 735 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 BZW1Q7L1Q6 419 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 BHLHA9Q7RTU4 235 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 TMCO2Q7Z6W1 182 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ITIH5Q86UX2 942 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 CPNE8Q86YQ8 564 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF276Q8N554 614 aa8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 EIF1ADQ8N9N8 165 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-202ENST00000503338 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms