RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 MLF2Q15773 248 aaPredicted RBP17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 BSPRYQ5W0U4 402 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 HFE2Q6ZVN8 426 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 MIB1Q86YT6 1006 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 FLCNQ8NFG4 579 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 STK32AQ8WU08 396 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 SLC20A1Q8WUM9 679 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 DDX1Q92499 740 aaKnown RBP17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 EDEM1Q92611 657 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 NOX5Q96PH1 765 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 SLC4A5Q9BY07 1137 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 LHX5Q9H2C1 402 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 DUS2Q9NX74 493 aaKnown RBP17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 TJP2Q9UDY2 1190 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 RASAL2Q9UJF2 1139 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
TSPAN17-203ENST00000503030 COL4A3Q01955 1670 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 ARNTLO00327 626 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 GPR37L1O60883 481 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 ARSAP15289 507 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 TCF3P15923 654 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 RPL34P49207 117 aaKnown RBP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 KPNA1P52294 538 aaPredicted RBP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 TPRG1Q6ZUI0 275 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 DDX42Q86XP3 938 aaKnown RBP eCLIP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 SCML4Q8N228 414 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 TMEM35BQ8NCS4 154 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 RNF139Q8WU17 664 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 IRGQQ8WZA9 623 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 GOLGA1Q92805 767 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 PPP1R13BQ96KQ4 1090 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 CPXM1Q96SM3 734 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 CDK5RAP1Q96SZ6 601 aaKnown RBP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 XPO4Q9C0E2 1151 aaKnown RBP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 EBF3Q9H4W6 596 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 SYNCQ9H7C4 482 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 GTSE1Q9NYZ3 720 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 NOCTQ9UK39 431 aaKnown RBP17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 SH3BP1Q9Y3L3 701 aa17.62■□□□□ 0.41
TSPAN17-203ENST00000503030 KIF26AQ9ULI4 1882 aaPredicted RBP17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 PAPSS1O43252 624 aaPredicted RBP17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 TPM3P06753 285 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 HMBSP08397 361 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 PDGFRLQ15198 375 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 KLHDC10Q6PID8 442 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 TMEM110Q86TL2 294 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 IPO4Q8TEX9 1081 aaKnown RBP17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 OSCP1Q8WVF1 389 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 BAP1Q92560 729 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 FAM149B1Q96BN6 582 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 FAM83CQ9BQN1 747 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 KLF16Q9BXK1 252 aaPredicted RBP17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 TBC1D17Q9HA65 648 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 TRPV5Q9NQA5 729 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 PIAS3Q9Y6X2 628 aa17.61■□□□□ 0.41
TSPAN17-203ENST00000503030 LRRC53A6NM62 1247 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 PRR33A8MZF0 331 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 SART1O43290 800 aaKnown RBP17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 LTFP02788 710 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 FERP16591 822 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 CHRNB2P17787 502 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 CD72P21854 359 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 SOX9P48436 509 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 CDR2Q01850 454 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 GOLGA8FQ08AF8 430 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 GOLGA8DPQ0D2H9 430 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 RUNX3Q13761 415 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 ITPRIPL2Q3MIP1 535 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 PTPN20Q4JDL3 420 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 NAA35Q5VZE5 725 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 ZNF677Q86XU0 584 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 ZNF276Q8N554 614 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 WBP2Q969T9 261 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 SHDQ96IW2 340 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 LRFN3Q9BTN0 628 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 LINC00597Q9H2U6 94 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 HPS4Q9NQG7 708 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 ABCC13Q9NSE7 274 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 SEPT11Q9NVA2 429 aaKnown RBP17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 MARCH2Q9P0N8 246 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 STRIP2Q9ULQ0 834 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 COL4A2P08572 1712 aa17.6■□□□□ 0.41
TSPAN17-203ENST00000503030 SLC12A8A0AV02 714 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 E2F8A0AVK6 867 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 CBFA2T2O43439 604 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 ERBB2P04626 1255 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 CCDC172P0C7W6 258 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 CDH5P33151 784 aaPredicted RBP17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 PBX1P40424 430 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 FMO1Q01740 532 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 PRKCQQ04759 706 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 ASIC2Q16515 512 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 OR6B2Q6IFH4 312 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 BMP8AQ7Z5Y6 402 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 SUGP1Q8IWZ8 645 aaKnown RBP17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 CPA6Q8N4T0 437 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 FBXL6Q8N531 539 aa17.59■□□□□ 0.41
TSPAN17-203ENST00000503030 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms