RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NDRG1Q92597 394 aaKnown RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 ZNF670Q9BS34 389 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 PNPLA8Q9NP80 782 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 LRFN2Q9ULH4 789 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 PLAAQ9Y263 795 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 DCDC2CA8MYV0 355 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 GOLGA8KD6RF30 607 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 CXCL10P02778 98 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 DCAF6Q58WW2 860 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 ZC3H12AQ5D1E8 599 aaKnown RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 RHBDF2Q6PJF5 856 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 BNIPLQ7Z465 357 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 NECAB2Q7Z6G3 386 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 PSTKQ8IV42 348 aaKnown RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 SCML4Q8N228 414 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 NPY6RQ99463 290 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 ADAM33Q9BZ11 813 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 DMAP1Q9NPF5 467 aaPredicted RBP22.94■■□□□ 1.26
PTPN13-205ENST00000502971 TMEM30AQ9NV96 361 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 ATP8A1Q9Y2Q0 1164 aa22.94■■□□□ 1.26
PTPN13-205ENST00000502971 NDC80O14777 642 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 RNF40O75150 1001 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 OAZ2O95190 189 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 BDNFP23560 247 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 IL4RP24394 825 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 PMS2P54278 862 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 GABPB1Q06547 395 aaPredicted RBP22.93■■□□□ 1.26
PTPN13-205ENST00000502971 MMRN1Q13201 1228 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 DPYSL2Q16555 572 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 C4orf50Q6ZRC1 276 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 LRRTM3Q86VH5 581 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 RIN2Q8WYP3 895 aaPredicted RBP22.93■■□□□ 1.26
PTPN13-205ENST00000502971 IRGQQ8WZA9 623 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 ZBTB9Q96C00 473 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 FAF2Q96CS3 445 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 CASD1Q96PB1 797 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 HIPK3Q9H422 1215 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 TMLHEQ9NVH6 421 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 GPATCH2LQ9NWQ4 482 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 DNAJB4Q9UDY4 337 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 ANAPC5Q9UJX4 755 aa22.93■■□□□ 1.26
PTPN13-205ENST00000502971 NRP1O14786 923 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 SYN3O14994 580 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 TP73O15350 636 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 TADA2AO75478 443 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 ITGA8P53708 1063 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 ATN1P54259 1190 aaPredicted RBP22.92■■□□□ 1.26
PTPN13-205ENST00000502971 ANKRD20A8PQ5CZ79 823 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 GPRIN1Q7Z2K8 1008 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 DIS3LQ8TF46 1054 aaKnown RBP22.92■■□□□ 1.26
PTPN13-205ENST00000502971 PAWRQ96IZ0 340 aaKnown RBP22.92■■□□□ 1.26
PTPN13-205ENST00000502971 PKNOX2Q96KN3 472 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 TMEM209Q96SK2 561 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 FAN1Q9Y2M0 1017 aa22.92■■□□□ 1.26
PTPN13-205ENST00000502971 MCF2LO15068 1137 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 ZBED1O96006 694 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 RARGP13631 454 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 TGM2P21980 687 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 L1CAMP32004 1257 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 RDXP35241 583 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 CA9Q16790 459 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 SPATA2LQ8IUW3 424 aaPredicted RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 TMEM121Q9BTD3 319 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 PABPC3Q9H361 631 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 NRDE2Q9H7Z3 1164 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 PCDH9Q9HC56 1237 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 RRN3Q9NYV6 651 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 VPS18Q9P253 973 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 SAE1Q9UBE0 346 aaPredicted RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 AP4E1Q9UPM8 1137 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 PRG3Q9Y2Y8 225 aaPredicted RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 YJEFN3A6XGL0 299 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 E7ENQ6 273 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 H0YGN5 161 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 SGK1O00141 431 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 APOL1O14791 398 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 CAPN9O14815 690 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 USP17L7P0C7H9 530 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 VPS41P49754 854 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 CDR1P51861 262 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 ATXN1P54253 815 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 EIF3EP60228 445 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 FAAP100Q0VG06 881 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 SLC9A4Q6AI14 798 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 PM20D1Q6GTS8 502 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 NPAS4Q8IUM7 802 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 DCP1BQ8IZD4 617 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 P3H4Q92791 437 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 COLEC11Q9BWP8 271 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 MRPL9Q9BYD2 267 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 RHOBTB2Q9BYZ6 727 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 ZCWPW1Q9H0M4 648 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 DHX35Q9H5Z1 703 aaKnown RBP22.91■■□□□ 1.26
PTPN13-205ENST00000502971 NFS1Q9Y697 457 aa22.91■■□□□ 1.26
PTPN13-205ENST00000502971 PECAM1P16284 738 aaPredicted RBP22.9■■□□□ 1.26
PTPN13-205ENST00000502971 RABGGTBP53611 331 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 NOMO1Q15155 1222 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 TCTN1Q2MV58 587 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 OTUD1Q5VV17 481 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms