RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CKMP06732 381 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 SRFP11831 508 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 FCARP24071 287 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 BRD2P25440 801 aaKnown RBP16.98■□□□□ 0.31
LMNA-217ENST00000498722 PDE6CP51160 858 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 ARHGAP17Q68EM7 881 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 TRIM67Q6ZTA4 783 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 YAF2Q8IY57 180 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 CMTM8Q8IZV2 173 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 TRIM58Q8NG06 486 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 SLC30A5Q8TAD4 765 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 SYT11Q9BT88 431 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 IRX2Q9BZI1 471 aaPredicted RBP16.98■□□□□ 0.31
LMNA-217ENST00000498722 PLA2G2FQ9BZM2 168 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 FBXO44Q9H4M3 255 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 TRIM10Q9UDY6 481 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 TSPAN16Q9UKR8 245 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 KIAA1257Q9ULG3 409 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 NENFQ9UMX5 172 aa16.98■□□□□ 0.31
LMNA-217ENST00000498722 C2orf78A6NCI8 922 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 HEPACAM2A8MVW5 462 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 DDX3XO00571 662 aaKnown RBP eCLIP16.97■□□□□ 0.31
LMNA-217ENST00000498722 TNFRSF10BO14763 440 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 URI1O94763 535 aaPredicted RBP16.97■□□□□ 0.31
LMNA-217ENST00000498722 PRAMEF12O95522 483 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 H2AFZP0C0S5 128 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 PPP3CCP48454 512 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 BCAT1P54687 386 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 IFI16Q16666 785 aaKnown RBP16.97■□□□□ 0.31
LMNA-217ENST00000498722 VITQ6UXI7 678 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 H2AFVQ71UI9 128 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 GPRIN1Q7Z2K8 1008 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 MON1AQ86VX9 555 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 ZNF677Q86XU0 584 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 ANKRD52Q8NB46 1076 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 PDZD8Q8NEN9 1154 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 UBA3Q8TBC4 463 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 E2F7Q96AV8 911 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 TRMT61BQ9BVS5 477 aaKnown RBP16.97■□□□□ 0.31
LMNA-217ENST00000498722 L2HGDHQ9H9P8 463 aa16.97■□□□□ 0.31
LMNA-217ENST00000498722 CHORDC1Q9UHD1 332 aaPredicted RBP16.97■□□□□ 0.31
LMNA-217ENST00000498722 TMEM221A6NGB7 291 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 M0QYV0 167 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 M0R296 226 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 O00370 1275 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 USP17L7P0C7H9 530 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 PSMC3P17980 439 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 HDCP19113 662 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 GPC5P78333 572 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 BST2Q10589 180 aaKnown RBP16.96■□□□□ 0.31
LMNA-217ENST00000498722 TMEM31Q5JXX7 168 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 TTC30AQ86WT1 665 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 ARL14EPQ8N8R7 260 aaPredicted RBP16.96■□□□□ 0.31
LMNA-217ENST00000498722 TFAP2BQ92481 460 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 NOX5Q96PH1 765 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 CYP2S1Q96SQ9 504 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 MFSD1Q9H3U5 465 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 BRD9Q9H8M2 597 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 TRPV4Q9HBA0 871 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
LMNA-217ENST00000498722 COMMD8Q9NX08 183 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 GMIPQ9P107 970 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 CA14Q9ULX7 337 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 TFR2Q9UP52 801 aa16.96■□□□□ 0.31
LMNA-217ENST00000498722 A0A0A6YYK5 440 aaPredicted RBP16.96■□□□□ 0.3
LMNA-217ENST00000498722 MACROD2A1Z1Q3 448 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 ZNF840PA6NDX5 716 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 CYP26A1O43174 497 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 THAP12O43422 761 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 GDI1P31150 447 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 PDE4CQ08493 712 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 STILQ15468 1287 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 SIX5Q8N196 739 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 CELF5Q8N6W0 485 aaKnown RBP16.96■□□□□ 0.3
LMNA-217ENST00000498722 EPS8L1Q8TE68 723 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 DEPDC1BQ8WUY9 529 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 OVCA2Q8WZ82 227 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 RSPRY1Q96DX4 576 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 CALR3Q96L12 384 aaKnown RBP16.96■□□□□ 0.3
LMNA-217ENST00000498722 SLC22A12Q96S37 553 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 NACA2Q9H009 215 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 TLR8Q9NR97 1041 aaKnown RBP16.96■□□□□ 0.3
LMNA-217ENST00000498722 TDP1Q9NUW8 608 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.96■□□□□ 0.3
LMNA-217ENST00000498722 CCL26Q9Y258 94 aa16.96■□□□□ 0.3
LMNA-217ENST00000498722 MYOFQ9NZM1 2061 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 SOBPA7XYQ1 873 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 HHLA1C9JL84 531 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 STK25O00506 426 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 MED7O43513 233 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 SLU7O95391 586 aaKnown RBP16.95■□□□□ 0.3
LMNA-217ENST00000498722 GZMAP12544 262 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 CYP11B1P15538 503 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 GNA15P30679 374 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 ZNF132P52740 706 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 NAP1L1P55209 391 aaKnown RBP16.95■□□□□ 0.3
LMNA-217ENST00000498722 PFKPQ01813 784 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 CDR2Q01850 454 aa16.95■□□□□ 0.3
LMNA-217ENST00000498722 LCLAT1Q6UWP7 414 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms