RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 FSIP1Q8NA03 581 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 NFKBIDQ8NI38 313 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 SUN3Q8TAQ9 357 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 CUL5Q93034 780 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 MARS2Q96GW9 593 aaKnown RBP9.1□□□□□ -0.95
SNX13-212ENST00000498463 SLC25A18Q9H1K4 315 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 CCDC134Q9H6E4 229 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 ZCCHC17Q9NP64 241 aaKnown RBP9.1□□□□□ -0.95
SNX13-212ENST00000498463 POGKQ9P215 609 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 CNOT7Q9UIV1 285 aaKnown RBP9.1□□□□□ -0.95
SNX13-212ENST00000498463 BAG5Q9UL15 447 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 ZBTB1Q9Y2K1 713 aa9.1□□□□□ -0.95
SNX13-212ENST00000498463 hCG_1807616A0A1W2PRN6 198 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 SEMA7AO75326 666 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 CSF1RP07333 972 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 FURINP09958 794 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 SPATA31D3P0C874 917 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 EPHA8P29322 1005 aaPredicted RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 UQCRC1P31930 480 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 CCNIQ14094 377 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 PSMD6Q15008 389 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 ARHGAP40Q5TG30 622 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 MCTP2Q6DN12 878 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 RGS7BPQ6MZT1 257 aaPredicted RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 DRICH1Q6PGQ1 229 aaPredicted RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 SPATA31D4Q6ZUB0 917 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 PIK3AP1Q6ZUJ8 805 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 SLC15A3Q8IY34 581 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 FSTL5Q8N475 847 aaPredicted RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 TXNDC5Q8NBS9 432 aaKnown RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 CCDC191Q8NCU4 936 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 DIRC2Q96SL1 478 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 CPPED1Q9BRF8 314 aaPredicted RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 TXLNGYQ9BZA5 131 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 SYNCQ9H7C4 482 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 GCM1Q9NP62 436 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 DIAPH3Q9NSV4 1193 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 PCMTD2Q9NV79 361 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 SEPT11Q9NVA2 429 aaKnown RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 SMG5Q9UPR3 1016 aaKnown RBP9.09□□□□□ -0.95
SNX13-212ENST00000498463 GDAQ9Y2T3 454 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 PSAT1Q9Y617 370 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 COL15A1P39059 1388 aa9.09□□□□□ -0.95
SNX13-212ENST00000498463 GXYLT2A0PJZ3 443 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 TNPO2O14787 897 aaKnown RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 HEXIM1O94992 359 aaKnown RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 ITGALP20701 1170 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 PPIFP30405 207 aaKnown RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 PRKAR1BP31321 381 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 RGS2P41220 211 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 GATMP50440 423 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 TIAL1Q01085 375 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNX13-212ENST00000498463 CREB5Q02930 508 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 TDGQ13569 410 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 CAMK1Q14012 370 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 DCTN1Q14203 1278 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 LRRC24Q50LG9 513 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 INO80CQ6PI98 192 aaPredicted RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 FAM111BQ6SJ93 734 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 LSM14AQ8ND56 463 aaKnown RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 METTL6Q8TCB7 284 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 SLC2A12Q8TD20 617 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 RADILQ96JH8 1075 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 MPHOSPH8Q99549 860 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 HERC2P3Q9BVR0 1158 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 NSUN3Q9H649 340 aaKnown RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 STN1Q9H668 368 aaKnown RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 KCNK12Q9HB15 430 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 ZDHHC7Q9NXF8 308 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 TAS2R10Q9NYW0 307 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 CFDP1Q9UEE9 299 aaPredicted RBP9.08□□□□□ -0.96
SNX13-212ENST00000498463 RIMKLBQ9ULI2 386 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 SLC27A6Q9Y2P4 619 aa9.08□□□□□ -0.96
SNX13-212ENST00000498463 FAM170AA1A519 330 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 PABPN1LA6NDY0 278 aaKnown RBP9.07□□□□□ -0.96
SNX13-212ENST00000498463 ZNF503-AS2A6NEH8 195 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 GUCY1B2O75343 617 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 GNAT2P19087 354 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 PSMA4P25789 261 aaKnown RBP9.07□□□□□ -0.96
SNX13-212ENST00000498463 MGAT1P26572 445 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 HARS2P49590 506 aaKnown RBP9.07□□□□□ -0.96
SNX13-212ENST00000498463 MC2RQ01718 297 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 MC1RQ01726 317 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 TBCCQ15814 346 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 ZNF569Q5MCW4 686 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 CBWD5Q5RIA9 395 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 CLEC9AQ6UXN8 241 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 KRT74Q7RTS7 529 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 RHOT2Q8IXI1 618 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 GPR135Q8IZ08 494 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNX13-212ENST00000498463 BAG1Q99933 345 aaPredicted RBP9.07□□□□□ -0.96
SNX13-212ENST00000498463 PAAF1Q9BRP4 392 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 CTTNBP2NLQ9P2B4 639 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 PCDHGB4Q9UN71 923 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 CLCA2Q9UQC9 943 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 RCE1Q9Y256 329 aa9.07□□□□□ -0.96
SNX13-212ENST00000498463 SNX8Q9Y5X2 465 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms