RNA–Protein interactions for RNA: ENST00000498328.1

USP33-210, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-210ENST00000498328 CALRP27797 417 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 PHKA1P46020 1223 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 FXR1P51114 621 aaKnown RBP eCLIP2.95□□□□□ -1.94
USP33-210ENST00000498328 E2F1Q01094 437 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 SETQ01105 290 aaPredicted RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 TCF15Q12870 199 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 MTX1Q13505 466 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 KHDC1Q4VXA5 237 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 TMTC4Q5T4D3 741 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 DEPDC1Q5TB30 811 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 ZNF771Q7L3S4 317 aaPredicted RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 PPP1R32Q7Z5V6 425 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 BCDIN3DQ7Z5W3 292 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 RPAINQ86UA6 219 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 CAND1Q86VP6 1230 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 JAZF1Q86VZ6 243 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 TICAM2Q86XR7 235 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 RAB11FIP4Q86YS3 637 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 LIX1LQ8IVB5 337 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 MNS1Q8NEH6 495 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 NGDNQ8NEJ9 315 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 ZNF398Q8TD17 642 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 WBP2Q969T9 261 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 LENG8Q96PV6 779 aaPredicted RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 VRK1Q99986 396 aaPredicted RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 SF3B5Q9BWJ5 86 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 WDCPQ9H6R7 721 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 RBM28Q9NW13 759 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 CGNQ9P2M7 1197 aaKnown RBP2.95□□□□□ -1.94
USP33-210ENST00000498328 GABRQQ9UN88 632 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 CCDC18Q5T9S5 1454 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 PLEKHH2Q8IVE3 1493 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 VCANP13611 3396 aa2.95□□□□□ -1.94
USP33-210ENST00000498328 TCF20Q9UGU0 1960 aaKnown RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 ARHGAP31Q2M1Z3 1444 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 MAP3K4Q9Y6R4 1608 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 KIF1CO43896 1103 aaKnown RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 CGAP01215 116 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 TPM3P06753 285 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 PIM1P11309 404 aaPredicted RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 TBXAS1P24557 533 aaPredicted RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 TACR3P29371 465 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 LRPAP1P30533 357 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 COPB1P53618 953 aaKnown RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 LILRA4P59901 499 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 CBX1P83916 185 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 LMOD3Q0VAK6 560 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 KLHL40Q2TBA0 621 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 HSP90AB3PQ58FF7 597 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 RANBP10Q6VN20 620 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 DCDC5Q6ZRR9 648 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 ZNF329Q86UD4 541 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 SPATA2LQ8IUW3 424 aaPredicted RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 NGEFQ8N5V2 710 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 IQCF1Q8N6M8 205 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 C3orf20Q8ND61 904 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 B4GALNT2Q8NHY0 566 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 JPH3Q8WXH2 748 aaPredicted RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 SNX21Q969T3 373 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 MYCBPQ99417 103 aaPredicted RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 NCAPGQ9BPX3 1015 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 POLR3GLQ9BT43 218 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 ARHGAP39Q9C0H5 1083 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 SEMA4BQ9NPR2 832 aaPredicted RBP2.94□□□□□ -1.94
USP33-210ENST00000498328 HESX1Q9UBX0 185 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 MRFAP1Q9Y605 127 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 GRIN2AQ12879 1464 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 TRANK1O15050 2925 aa2.94□□□□□ -1.94
USP33-210ENST00000498328 AFF2P51816 1311 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 MIA2Q96PC5 1412 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 SPTBN5Q9NRC6 3674 aaKnown RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 NPC1L1Q9UHC9 1359 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 VGLL3A8MV65 326 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 FGAP02671 866 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 TNNT3P45378 269 aaPredicted RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 RBM6P78332 1123 aaKnown RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 KRT17Q04695 432 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 CHAF1AQ13111 956 aaPredicted RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 IL10RAQ13651 578 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 KCNB1Q14721 858 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 STAT4Q14765 748 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 TRAPPC11Q7Z392 1133 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 HSCBQ8IWL3 235 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 SMC5Q8IY18 1101 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 NUDCD2Q8WVJ2 157 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 ANKRD7Q92527 254 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 FAM122AQ96E09 287 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 RBM38Q9H0Z9 239 aaKnown RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 CAAP1Q9H8G2 361 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 VTA1Q9NP79 307 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 SMC4Q9NTJ3 1288 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 MKS1Q9NXB0 559 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 RAI14Q9P0K7 980 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 DNMT3BQ9UBC3 853 aaKnown RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 AGAP1Q9UPQ3 857 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 SSX2IPQ9Y2D8 614 aa2.93□□□□□ -1.94
USP33-210ENST00000498328 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 MORC2Q9Y6X9 1032 aaPredicted RBP2.93□□□□□ -1.94
USP33-210ENST00000498328 CHD8Q9HCK8 2581 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms