RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ITGB3P05106 788 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 MMP3P08254 477 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC175P0C221 793 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 AKR1A1P14550 325 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 KLRC1P26715 233 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 GTF2H1P32780 548 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CNR2P34972 360 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 MATR3P43243 847 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 MAPKAPK2P49137 400 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 FMO5P49326 533 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 VAMP7P51809 220 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 IGBP1P78318 339 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 KRT83P78385 493 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CDK17Q00537 523 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 POU5F1BQ06416 359 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 GOLGA8FQ08AF8 430 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 GOLGA8DPQ0D2H9 430 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 LAMTOR4Q0VGL1 99 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CAPSQ13938 189 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 PTPN14Q15678 1187 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 MAPK6Q16659 721 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 TMEM63BQ5T3F8 832 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 RRAGAQ7L523 313 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 TLK2Q86UE8 772 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 SLCO6A1Q86UG4 719 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 RHPN2Q8IUC4 686 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 TMEM139Q8IV31 216 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC170Q8IYT3 715 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CCAR2Q8N163 923 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 TXLNBQ8N3L3 684 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 METTL13Q8N6R0 699 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 FNIP1Q8TF40 1166 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 DDX1Q92499 740 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 SYN2Q92777 582 aaPredicted RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 SLC35C1Q96A29 364 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 DNAJC7Q99615 494 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 CBWD1Q9BRT8 395 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 LSM14BQ9BX40 385 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 MRPL4Q9BYD3 311 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 TTYH3Q9C0H2 523 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 RNPEPQ9H4A4 650 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 SPC25Q9HBM1 224 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 FAM207AQ9NSI2 230 aaPredicted RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 FBXL5Q9UKA1 691 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 ACSL6Q9UKU0 697 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 AGO2Q9UKV8 859 aaKnown RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 MYO6Q9UM54 1294 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 EPN1Q9Y6I3 576 aaPredicted RBP5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 GBF1Q92538 1859 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 UMODL1Q5DID0 1318 aa5.7□□□□□ -1.5
HMGXB4-208ENST00000498325 ACKR2O00590 384 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 RGS13O14921 159 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PMM2O15305 246 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 CLDN3O15551 220 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 EXTL3O43909 919 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 ZEB2O60315 1214 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 DUSP11O75319 330 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 HTR3BO95264 441 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PRAMEF1O95521 474 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 C22orf31O95567 290 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PRKCBP05771 671 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC172P0C7W6 258 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SRGAP2CP0DJJ0 459 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 GNAT1P11488 350 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 TNNT1P13805 278 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 ATP2A2P16615 1042 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SLC9A1P19634 815 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 ENDOUP21128 410 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PON1P27169 355 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 HNRNPH3P31942 346 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 NBL1P41271 181 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 KLK7P49862 253 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 CDK7P50613 346 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 HMGA2P52926 109 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PTENP60484 403 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 POLR2FP61218 127 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 NCBP1Q09161 790 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PPFIA1Q13136 1202 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SURF1Q15526 300 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SNRNP35Q16560 246 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 MEA1Q16626 185 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 KLHDC7AQ5VTJ3 777 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SFMBT2Q5VUG0 894 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 CPZQ66K79 652 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 E4F1Q66K89 784 aaPredicted RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 CDCA2Q69YH5 1023 aaPredicted RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 PDXDC1Q6P996 788 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 MTHFD1LQ6UB35 978 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SUGP1Q8IWZ8 645 aaKnown RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 C17orf53Q8N3J3 647 aaPredicted RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 LRRC71Q8N4P6 559 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 RNF149Q8NC42 400 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 GDPD5Q8WTR4 605 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 TRAPPC12Q8WVT3 735 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 EAF1Q96JC9 268 aaPredicted RBP5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 FAM81BQ96LP2 452 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC42Q96M95 316 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 SPAG5Q96R06 1193 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 FNBP1Q96RU3 617 aa5.69□□□□□ -1.5
HMGXB4-208ENST00000498325 C16orf70Q9BSU1 422 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms