RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PINK1Q9BXM7 581 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FUT8Q9BYC5 575 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZDHHC5Q9C0B5 715 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TASP1Q9H6P5 420 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MINDY3Q9H8M7 445 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 RNF121Q9H920 327 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 COPS7BQ9H9Q2 264 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 ATP6V0A4Q9HBG4 840 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 NCOA5Q9HCD5 579 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 XPNPEP3Q9NQH7 507 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 OLAHQ9NV23 265 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TMOD4Q9NZQ9 345 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MAFFQ9ULX9 164 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZNF148Q9UQR1 794 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 LAS1LQ9Y4W2 734 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 NOX1Q9Y5S8 564 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ITSN1Q15811 1721 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 N4BP2Q86UW6 1770 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 LOC102724200A0A096LPH7 203 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 KANSL1LA0AUZ9 987 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 LINC01553A4QN01 128 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MEGF11A6BM72 1044 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FAM196BA6NMK8 535 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 K7ESM1 405 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 QSOX1O00391 747 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SCAMP3O14828 347 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 DYRK3O43781 588 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 NDUFS2O75306 463 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PIGNO95427 931 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 IGKV4-1P06312 121 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CD53P19397 219 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MX1P20591 662 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 DRD1P21728 446 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GARTP22102 1010 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TRIM23P36406 574 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GNAQP50148 359 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TLE3Q04726 772 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 KIAA2012Q0VF49 1180 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 G3BP1Q13283 466 aaKnown RBP eCLIP1.52□□□□□ -2.17
XRN1-214ENST00000498077 DGKDQ16760 1214 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FAM102BQ5T8I3 360 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TMCO4Q5TGY1 634 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 STRIP1Q5VSL9 837 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TTLL5Q6EMB2 1281 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FRMD7Q6ZUT3 714 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZNF367Q7RTV3 350 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CACNA2D4Q7Z3S7 1137 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 HOOK3Q86VS8 718 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SPPL2CQ8IUH8 684 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 KRT78Q8N1N4 520 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CENPSQ8N2Z9 138 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 DENND6BQ8NEG7 585 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GPRC5AQ8NFJ5 357 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ZNF507Q8TCN5 953 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FBLIM1Q8WUP2 373 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CACTINQ8WUQ7 758 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 GRAMD1AQ96CP6 724 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CELF6Q96J87 481 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 MAML3Q96JK9 1138 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 LRR1Q96L50 414 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 JAKMIP1Q96N16 626 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 AMDHD1Q96NU7 426 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 BTBD9Q96Q07 612 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PAIP1Q9H074 479 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 LRRC40Q9H9A6 602 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PAPOLBQ9NRJ5 636 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 DCAF13Q9NV06 445 aaKnown RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 PTGFRNQ9P2B2 879 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 BAG5Q9UL15 447 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 BTBD3Q9Y2F9 522 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 C15orf41Q9Y2V0 281 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MTUS2Q5JR59 1369 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 A0A0G2JK05 382 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ANKRD66B4E2M5 251 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 GOLGA8MH3BSY2 632 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 H7C0S8 307 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 FLRT2O43155 660 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ADAM12O43184 909 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SPAG7O75391 227 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SGPL1O95470 568 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 COL6A2P12110 1019 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PTBP1P26599 531 aaKnown RBP eCLIP1.52□□□□□ -2.171e-7■■■■■ 46.3
XRN1-214ENST00000498077 TPP2P29144 1249 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 PMLP29590 882 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TTKP33981 857 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 CNR2P34972 360 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 PPARGP37231 505 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 ALDH1A3P47895 512 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 MEOX1P50221 254 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TOB1P50616 345 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 KRT76Q01546 638 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 LRRC63Q05C16 580 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 BTKQ06187 659 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 ASPHQ12797 758 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SKP2Q13309 424 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SNAPC2Q13487 334 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 SPARCL1Q14515 664 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 TBCEQ15813 527 aaPredicted RBP1.52□□□□□ -2.17
XRN1-214ENST00000498077 UGP2Q16851 508 aa1.52□□□□□ -2.17
XRN1-214ENST00000498077 KLHL40Q2TBA0 621 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms