RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 SNX25Q9H3E2 840 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 DPP7Q9UHL4 492 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 USP18Q9UMW8 372 aa20.75■□□□□ 0.91
ACTN4-208ENST00000497637 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
ACTN4-208ENST00000497637 TRIP11Q15643 1979 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 ARL5CA6NH57 179 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 SIGLEC16A6NMB1 481 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 KRIT1O00522 736 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 HUS1O60921 280 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 ERLIN1O75477 346 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 MLH1P40692 756 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 MARCKSL1P49006 195 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 PPP2R5EQ16537 467 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 PKDCCQ504Y2 493 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 CLLU1OSQ5K130 101 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 SEL1L2Q5TEA6 688 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 CC2D1AQ6P1N0 951 aaPredicted RBP20.74■□□□□ 0.91
ACTN4-208ENST00000497637 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 APPL2Q8NEU8 664 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 AUTS2Q8WXX7 1259 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 RSAD1Q9HA92 442 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 WDR6Q9NNW5 1121 aaKnown RBP20.74■□□□□ 0.91
ACTN4-208ENST00000497637 SLC2A4RGQ9NR83 387 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 TSPAN16Q9UKR8 245 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 L1RE1Q9UN81 338 aa20.74■□□□□ 0.91
ACTN4-208ENST00000497637 SMG5Q9UPR3 1016 aaKnown RBP20.74■□□□□ 0.91
ACTN4-208ENST00000497637 DENND4AQ7Z401 1863 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 A8MXQ7 604 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 NT5C1B-RDH14C9J2C7 533 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 INPPL1O15357 1258 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 ATP8B1O43520 1251 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 TBC1D4O60343 1298 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 FGGP02679 453 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 KLRC2P26717 231 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 STARD6P59095 220 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 PSMC1P62191 440 aaKnown RBP20.73■□□□□ 0.91
ACTN4-208ENST00000497637 PDCLQ13371 301 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 ZNF211Q13398 564 aaPredicted RBP20.73■□□□□ 0.91
ACTN4-208ENST00000497637 ACAP1Q15027 740 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 LONRF2Q1L5Z9 754 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 GOLGA7BQ2TAP0 167 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 PPM1JQ5JR12 505 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 C8orf74Q6P047 294 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 ZNF598Q86UK7 904 aaKnown RBP20.73■□□□□ 0.91
ACTN4-208ENST00000497637 XYLT1Q86Y38 959 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 UBA3Q8TBC4 463 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 MCRS1Q96EZ8 462 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 IGSF21Q96ID5 467 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 CPXM1Q96SM3 734 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 KRT12Q99456 494 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 ARFGAP3Q9NP61 516 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 SPATA6Q9NWH7 488 aaPredicted RBP20.73■□□□□ 0.91
ACTN4-208ENST00000497637 ZSCAN32Q9NX65 697 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 SCN1AP35498 2009 aa20.73■□□□□ 0.91
ACTN4-208ENST00000497637 CYB561D2O14569 222 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 ZRANB2O95218 330 aaKnown RBP eCLIP20.72■□□□□ 0.91
ACTN4-208ENST00000497637 GJB6O95452 261 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 ERBB2P04626 1255 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 PYGMP11217 842 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 PAX3P23760 479 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 MAGEA9P43362 315 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 CLCN4P51793 760 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 RPL7AP62424 266 aaKnown RBP20.72■□□□□ 0.91
ACTN4-208ENST00000497637 PIGHQ14442 188 aaPredicted RBP20.72■□□□□ 0.91
ACTN4-208ENST00000497637 CYP4A22Q5TCH4 519 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 DCUN1D2Q6PH85 259 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 OSTM1Q86WC4 334 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 ADGRF2Q8IZF7 708 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 NIPA2Q8N8Q9 360 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 ZBTB44Q8NCP5 570 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 IPO4Q8TEX9 1081 aaKnown RBP20.72■□□□□ 0.91
ACTN4-208ENST00000497637 FNIP1Q8TF40 1166 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 STK32AQ8WU08 396 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 DDX27Q96GQ7 796 aaKnown RBP20.72■□□□□ 0.91
ACTN4-208ENST00000497637 SLITRK6Q9H5Y7 841 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.72■□□□□ 0.912e-10■□□□□ 8.4
ACTN4-208ENST00000497637 GMEB2Q9UKD1 530 aa20.72■□□□□ 0.91
ACTN4-208ENST00000497637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.72■□□□□ 0.91
ACTN4-208ENST00000497637 PODXLO00592 558 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 GLULP15104 373 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 SCNN1GP51170 649 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 PPP1R26Q5T8A7 1209 aaPredicted RBP20.71■□□□□ 0.91
ACTN4-208ENST00000497637 LRRC38Q5VT99 294 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 CCNI2Q6ZMN8 369 aaPredicted RBP20.71■□□□□ 0.91
ACTN4-208ENST00000497637 RHOT1Q8IXI2 618 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 C12orf29Q8N999 325 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 NETO1Q8TDF5 533 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 AP1M1Q9BXS5 423 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 SLC4A5Q9BY07 1137 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 SYNCQ9H7C4 482 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 ZNF446Q9NWS9 450 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 HESX1Q9UBX0 185 aa20.71■□□□□ 0.91
ACTN4-208ENST00000497637 DMGDHQ9UI17 866 aaKnown RBP20.71■□□□□ 0.91
ACTN4-208ENST00000497637 GABRDO14764 452 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 SLC30A4O14863 429 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 PDGFRBP09619 1106 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 KRT3P12035 628 aa20.7■□□□□ 0.9
ACTN4-208ENST00000497637 TGM1P22735 817 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms