RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 USP37Q86T82 979 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 NLRP14Q86W24 1093 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 GAS2L3Q86XJ1 694 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 KIAA2013Q8IYS2 634 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 FRMD1Q8N878 549 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 ANKRD44Q8N8A2 993 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 FAM71DQ8N9W8 422 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TDRD5Q8NAT2 981 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 DNERQ8NFT8 737 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 HMGB4Q8WW32 186 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 VPS33AQ96AX1 596 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 PERPQ96FX8 193 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 RBM17Q96I25 401 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 FAM227BQ96M60 508 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 CCDC43Q96MW1 224 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TSGA13Q96PP4 275 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 LENG8Q96PV6 779 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 IWS1Q96ST2 819 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 FAM83CQ9BQN1 747 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TINAGL1Q9GZM7 467 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 INTS2Q9H0H0 1204 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TAOK3Q9H2K8 898 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SMARCAD1Q9H4L7 1026 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 PLEKHA2Q9HB19 425 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 BARX1Q9HBU1 254 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SEMA4BQ9NPR2 832 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SLC35C2Q9NQQ7 365 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 TMLHEQ9NVH6 421 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 MRPL15Q9P015 296 aaKnown RBP6.55□□□□□ -1.36
BRCA1-224ENST00000497488 SARDHQ9UL12 918 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 RABL2BQ9UNT1 228 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 GDAQ9Y2T3 454 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 ATRNL1Q5VV63 1379 aa6.55□□□□□ -1.36
BRCA1-224ENST00000497488 PRG4Q92954 1404 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 LIPT2A6NK58 231 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 KIF28PB7ZC32 967 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 M0QYG6 137 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PSMA7O14818 248 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ZBTB7AO95365 584 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 SPARCP09486 303 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PNLIPP16233 465 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 TLX1P31314 330 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 CIITAP33076 1130 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF135P52742 658 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 UBASH3AP57075 661 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 EVCP57679 992 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 SNRPNP63162 240 aaKnown RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 TBL3Q12788 808 aaKnown RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 KCNB1Q14721 858 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PPA1Q15181 289 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 SKIDA1Q1XH10 827 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF750Q32MQ0 723 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PLA1AQ53H76 456 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PRRT3Q5FWE3 981 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 CBWD5Q5RIA9 395 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ERMARDQ5T6L9 678 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 RAB12Q6IQ22 244 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF365Q70YC5 407 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 NUP54Q7Z3B4 507 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PIWIL3Q7Z3Z3 882 aaKnown RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF804AQ7Z570 1209 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 KCTD20Q7Z5Y7 419 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 SLC9B2Q86UD5 537 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 LRRC71Q8N4P6 559 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 DEPDC1BQ8WUY9 529 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 PTP4A1Q93096 173 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 APOL6Q9BWW8 343 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 STN1Q9H668 368 aaKnown RBP6.54□□□□□ -1.36
BRCA1-224ENST00000497488 MOCS1Q9NZB8 636 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 JKAMPQ9P055 326 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 ANAPC5Q9UJX4 755 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 NFU1Q9UMS0 254 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 AGAP1Q9UPQ3 857 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 SNX11Q9Y5W9 270 aa6.54□□□□□ -1.36
BRCA1-224ENST00000497488 CNTNAP5Q8WYK1 1306 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 MUSKO15146 869 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 DHX15O43143 795 aaKnown RBP6.53□□□□□ -1.36
BRCA1-224ENST00000497488 SEPT4O43236 478 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 SRGAP3O43295 1099 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 PIAS2O75928 621 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 ALDH1A2O94788 518 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 KLHL18O94889 574 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 LARGE1O95461 756 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 TPM2P07951 284 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 DBHP09172 617 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 ZGLP1P0C6A0 271 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 CYP2C9P11712 490 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 C6P13671 934 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 SLC6A4P31645 630 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 ICAM3P32942 547 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 PPARGP37231 505 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-224ENST00000497488 BUD31P41223 144 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-224ENST00000497488 VIPR2P41587 438 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 HSD17B4P51659 736 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 CYP4F8P98187 520 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 IL1RL1Q01638 556 aa6.53□□□□□ -1.36
BRCA1-224ENST00000497488 SF3A3Q12874 501 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-224ENST00000497488 TNFAIP1Q13829 316 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms