RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 TUBB4AP04350 444 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 NCAM1P13591 858 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 PDGFRAP16234 1089 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 GPD1P21695 349 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 SDC4P31431 198 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 RFC1P35251 1148 aaPredicted RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 PLA2G5P39877 138 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 MATKP42679 507 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 SLC1A1P43005 524 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 TUBP50607 506 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 USP46P62068 366 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 ITIH3Q06033 890 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 MTMR3Q13615 1198 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 ARHGAP15Q53QZ3 475 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 DCAF6Q58WW2 860 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 PPP1R15BQ5SWA1 713 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 PDZD4Q76G19 769 aaPredicted RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 RSRC2Q7L4I2 434 aaKnown RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 MAFAQ8NHW3 353 aaPredicted RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 CLEC4CQ8WTT0 213 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 SMG7Q92540 1137 aaKnown RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 MRPS31Q92665 395 aaKnown RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 CORO1BQ9BR76 489 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 CNPY3Q9BT09 278 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 DDX23Q9BUQ8 820 aaKnown RBP10.96□□□□□ -0.65
USP13-205ENST00000497380 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.65
USP13-205ENST00000497380 EYSQ5T1H1 3165 aa10.96□□□□□ -0.66
USP13-205ENST00000497380 MYO9BQ13459 2157 aa10.96□□□□□ -0.66
USP13-205ENST00000497380 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
USP13-205ENST00000497380 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 RCCD1A6NED2 376 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 C2CD4BA6NLJ0 364 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 RFPL2O75678 378 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 ABL1P00519 1130 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 ZDHHC11BP0C7U3 371 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 RARGP13631 454 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 PSMA2P25787 234 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 DDX6P26196 483 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP13-205ENST00000497380 GABRR2P28476 465 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 ATP5C1P36542 298 aaKnown RBP10.95□□□□□ -0.66
USP13-205ENST00000497380 PTPN9P43378 593 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 KPNA1P52294 538 aaPredicted RBP10.95□□□□□ -0.66
USP13-205ENST00000497380 ZNF143P52747 638 aaPredicted RBP10.95□□□□□ -0.66
USP13-205ENST00000497380 EPHA5P54756 1037 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 MTA1Q13330 715 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 SLC25A52Q3SY17 297 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 HECTD3Q5T447 861 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 CES5AQ6NT32 575 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 ANKRD54Q6NXT1 300 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 SND1Q7KZF4 910 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP13-205ENST00000497380 DEFB106AQ8N104 65 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 VN1R2Q8NFZ6 395 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 TPCN2Q8NHX9 752 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 RXFP2Q8WXD0 754 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 FAM161BQ96MY7 647 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 SLC2A13Q96QE2 648 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 OSGEPQ9NPF4 335 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 GMIPQ9P107 970 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 PLXNA3P51805 1871 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 PATJQ8NI35 1801 aa10.95□□□□□ -0.66
USP13-205ENST00000497380 ZNF840PA6NDX5 716 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 KIF2AO00139 706 aaPredicted RBP10.94□□□□□ -0.66
USP13-205ENST00000497380 DPYSL4O14531 572 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 BUB1O43683 1085 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 GRAP2O75791 330 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 F11P03951 625 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 MYL4P12829 197 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 MAN1A1P33908 653 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 FLT3P36888 993 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 RPL7AP62424 266 aaKnown RBP10.94□□□□□ -0.66
USP13-205ENST00000497380 ADGRE1Q14246 886 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 MESDQ14696 234 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 HADHQ16836 314 aaKnown RBP10.94□□□□□ -0.66
USP13-205ENST00000497380 ATAT1Q5SQI0 421 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 C11orf63Q6NUN7 778 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 KLHDC10Q6PID8 442 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 STRADAQ7RTN6 431 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 SCD5Q86SK9 330 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 GPR149Q86SP6 731 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 DAAM2Q86T65 1068 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 EMC1Q8N766 993 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 NIPA2Q8N8Q9 360 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 JOSD2Q8TAC2 188 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 NDRG1Q92597 394 aaKnown RBP10.94□□□□□ -0.66
USP13-205ENST00000497380 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP13-205ENST00000497380 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
USP13-205ENST00000497380 FAM122AQ96E09 287 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 RIPOR3Q96MK2 946 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 SERPINB11Q96P15 392 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 NACA2Q9H009 215 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 ATXN3LQ9H3M9 355 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP13-205ENST00000497380 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 DNMT3BQ9UBC3 853 aaKnown RBP10.94□□□□□ -0.66
USP13-205ENST00000497380 TFR2Q9UP52 801 aa10.94□□□□□ -0.66
USP13-205ENST00000497380 DUSP10Q9Y6W6 482 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms